RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 FRMD8P1Q9BZ68 369 aaPredicted RBP22.25■■□□□ 1.15
ATG4D-201ENST00000309469 PABPC3Q9H361 631 aaKnown RBP22.25■■□□□ 1.15
ATG4D-201ENST00000309469 CRTAC1Q9NQ79 661 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.25■■□□□ 1.15
ATG4D-201ENST00000309469 PTPN9P43378 593 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 VPS41P49754 854 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 ARSEP51690 589 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 PLCB3Q01970 1234 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 SLMAPQ14BN4 828 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 OASLQ15646 514 aaKnown RBP22.25■■□□□ 1.15
ATG4D-201ENST00000309469 SCYL2Q6P3W7 929 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 RFX6Q8HWS3 928 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 ALLCQ8N6M5 410 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 SLC35B2Q8TB61 432 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 MED10Q9BTT4 135 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 CALN1Q9BXU9 219 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 INPP5FQ9Y2H2 1132 aa22.25■■□□□ 1.15
ATG4D-201ENST00000309469 DNAH12Q6ZR08 3092 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 ITGAVP06756 1048 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 ITGA8P53708 1063 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 CDH6P55285 790 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 PRMT2P55345 433 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 ZNF844Q08AG5 666 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 EFHC1Q5JVL4 640 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 BBOF1Q8ND07 529 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 CCHCR1Q8TD31 782 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 KCTD13Q8WZ19 329 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 EPB41L4BQ9H329 900 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 RGS18Q9NS28 235 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 ANAPC5Q9UJX4 755 aa22.24■■□□□ 1.15
ATG4D-201ENST00000309469 BEST1O76090 585 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 B3GAT3O94766 335 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 OTUD4Q01804 1114 aaKnown RBP22.23■■□□□ 1.15
ATG4D-201ENST00000309469 TUSC3Q13454 348 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 RTN4RL1Q86UN2 441 aaPredicted RBP22.23■■□□□ 1.15
ATG4D-201ENST00000309469 FAM76AQ8TAV0 307 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 ACTL9Q8TC94 416 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 TEKT4Q8WW24 435 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 C11orf84Q9BUA3 381 aaPredicted RBP22.23■■□□□ 1.15
ATG4D-201ENST00000309469 SAE1Q9UBE0 346 aaPredicted RBP22.23■■□□□ 1.15
ATG4D-201ENST00000309469 CDH9Q9ULB4 789 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 FAM200BP0CF97 657 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 ODC1P11926 461 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 RARGP13631 454 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 LMAN1P49257 510 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 HDAC4P56524 1084 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 MBTPS1Q14703 1052 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 CLEC20AQ6ZU45 233 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 PRUNE1Q86TP1 453 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 CENPIQ92674 756 aaPredicted RBP22.23■■□□□ 1.15
ATG4D-201ENST00000309469 UROC1Q96N76 676 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 TBCBQ99426 244 aa22.23■■□□□ 1.15
ATG4D-201ENST00000309469 DDX23Q9BUQ8 820 aaKnown RBP22.23■■□□□ 1.15
ATG4D-201ENST00000309469 MAK16Q9BXY0 300 aaKnown RBP22.23■■□□□ 1.15
ATG4D-201ENST00000309469 MYBPHLA2RUH7 354 aa22.22■■□□□ 1.15
ATG4D-201ENST00000309469 GOLGA6L10A6NI86 522 aa22.22■■□□□ 1.15
ATG4D-201ENST00000309469 ARVCFO00192 962 aa22.22■■□□□ 1.15
ATG4D-201ENST00000309469 TFE3P19532 575 aaPredicted RBP22.22■■□□□ 1.15
ATG4D-201ENST00000309469 ADIGQ0VDE8 80 aa22.22■■□□□ 1.15
ATG4D-201ENST00000309469 MMRN1Q13201 1228 aa22.22■■□□□ 1.15
ATG4D-201ENST00000309469 DPYSL3Q14195 570 aa22.22■■□□□ 1.15
ATG4D-201ENST00000309469 PDK2Q15119 407 aa22.22■■□□□ 1.15
ATG4D-201ENST00000309469 CD300LGQ6UXG3 332 aa22.22■■□□□ 1.15
ATG4D-201ENST00000309469 MAP7D3Q8IWC1 876 aa22.22■■□□□ 1.15
ATG4D-201ENST00000309469 SEMA4AQ9H3S1 761 aa22.22■■□□□ 1.15
ATG4D-201ENST00000309469 TMBIM4Q9HC24 238 aa22.22■■□□□ 1.15
ATG4D-201ENST00000309469 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.22■■□□□ 1.15
ATG4D-201ENST00000309469 PHF24Q9UPV7 400 aa22.22■■□□□ 1.15
ATG4D-201ENST00000309469 I3L4J1 428 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 INPPL1O15357 1258 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 NUDT17P0C025 328 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 MYZAPP0CAP1 466 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 PAX3P23760 479 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 ADCY1Q08828 1119 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 KRT81Q14533 505 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 IZUMO3Q5VZ72 239 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 GLIS1Q8NBF1 620 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 TMEM121Q9BTD3 319 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 TSPYL1Q9H0U9 437 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 LRRC4Q9HBW1 653 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 AAASQ9NRG9 546 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 KRT82Q9NSB4 513 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 C9IYK1 514 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 APOC4-APOC2K7ER74 178 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 APOC2P02655 101 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 PCSK1P29120 753 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 BRCC3P46736 316 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 CDR1P51861 262 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 EIF3BP55884 814 aaKnown RBP22.21■■□□□ 1.15
ATG4D-201ENST00000309469 MAP3K7CLP57077 242 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 PAN2Q504Q3 1202 aaKnown RBP22.21■■□□□ 1.15
ATG4D-201ENST00000309469 KCTD16Q68DU8 428 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 SLC24A5Q71RS6 500 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 CCDC25Q86WR0 208 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 METTL23Q86XA0 190 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 MYCBPAPQ8TBZ2 947 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 SPATA18Q8TC71 538 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 PCED1BQ96HM7 432 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 ATP6V1G3Q96LB4 118 aa22.21■■□□□ 1.15
ATG4D-201ENST00000309469 PTCH2Q9Y6C5 1203 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms