RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 GALNSP34059 522 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 MTIF2P46199 727 aaKnown RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 CREMQ03060 361 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 YWHAHQ04917 246 aaPredicted RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 CETN1Q12798 172 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 KCNC3Q14003 757 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 ELF2Q15723 593 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 PSMD5Q16401 504 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 ZNF699Q32M78 642 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 VWA3BQ502W6 1294 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 HSP90AA4PQ58FG1 418 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 ZNF667Q5HYK9 610 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 WSCD1Q658N2 575 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 SLC8B1Q6J4K2 584 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 PRSS55Q6UWB4 352 aaPredicted RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 APTXQ7Z2E3 356 aaKnown RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 TMEM86AQ8N2M4 240 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 PDCL2Q8N4E4 241 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.72□□□□□ -1.01
CHD6-201ENST00000309279 HNRNPLLQ8WVV9 542 aaKnown RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 AUTS2Q8WXX7 1259 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 CLSTN3Q9BQT9 956 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 TRIM8Q9BZR9 551 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 NDST4Q9H3R1 872 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 MMRN2Q9H8L6 949 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 LIMA1Q9UHB6 759 aaKnown RBP8.72□□□□□ -1.01
CHD6-201ENST00000309279 FBXL5Q9UKA1 691 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 BLOC1S6Q9UL45 172 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 L1RE1Q9UN81 338 aa8.72□□□□□ -1.01
CHD6-201ENST00000309279 C2orf81A6NN90 581 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 BECN2A8MW95 431 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 VSTM5A8MXK1 200 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 RASA4BC9J798 803 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 H7C4K7 107 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 C2CD2LO14523 706 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 MUSKO15146 869 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 TEX28O15482 410 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 PLOD3O60568 738 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 MTRF1O75570 445 aaKnown RBP8.71□□□□□ -1.02
CHD6-201ENST00000309279 FOSL2P15408 326 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 LHX1P48742 406 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 DGKGP49619 791 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 NOP14P78316 857 aaKnown RBP8.71□□□□□ -1.02
CHD6-201ENST00000309279 MYL7Q01449 175 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 PRKG2Q13237 762 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 KRT72Q14CN4 511 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 KRT31Q15323 416 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 DUSP6Q16828 381 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 TCEAL5Q5H9L2 206 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 CFAP58Q5T655 872 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 OVOS1Q6IE37 1185 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 IGF2-ASQ6U949 168 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 RSPO2Q6UXX9 243 aaPredicted RBP8.71□□□□□ -1.02
CHD6-201ENST00000309279 ADGRD2Q7Z7M1 963 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 LUZP1Q86V48 1076 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 NKAPQ8N5F7 415 aaKnown RBP8.71□□□□□ -1.02
CHD6-201ENST00000309279 LSMEM1Q8N8F7 131 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 EHBP1Q8NDI1 1231 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 BRSK1Q8TDC3 778 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 CHAC2Q8WUX2 184 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 KBTBD7Q8WVZ9 684 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 PPP2R3CQ969Q6 453 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 ASIC4Q96FT7 647 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 KLHL5Q96PQ7 755 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 CDCA3Q99618 268 aaPredicted RBP8.71□□□□□ -1.02
CHD6-201ENST00000309279 RTP3Q9BQQ7 232 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 SLC39A3Q9BRY0 314 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 PI4K2AQ9BTU6 479 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 EMILIN2Q9BXX0 1053 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 BCO2Q9BYV7 579 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 IMPG2Q9BZV3 1241 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 FAM124BQ9H5Z6 455 aaPredicted RBP8.71□□□□□ -1.02
CHD6-201ENST00000309279 APOBEC3GQ9HC16 384 aaKnown RBP8.71□□□□□ -1.02
CHD6-201ENST00000309279 MCM8Q9UJA3 840 aa8.71□□□□□ -1.02
CHD6-201ENST00000309279 TIMM13Q9Y5L4 95 aaPredicted RBP8.71□□□□□ -1.02
CHD6-201ENST00000309279 FSD2A1L4K1 749 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 OR6C75A6NL08 312 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 RTCAO00442 366 aaKnown RBP8.7□□□□□ -1.02
CHD6-201ENST00000309279 NCK2O43639 380 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 CLASP2O75122 1294 aaKnown RBP8.7□□□□□ -1.02
CHD6-201ENST00000309279 CNOT4O95628 575 aaKnown RBP8.7□□□□□ -1.02
CHD6-201ENST00000309279 ADH1AP07327 375 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 SFTPCP11686 197 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 ATP1A3P13637 1013 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 P4HA1P13674 534 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 WARSP23381 471 aaKnown RBP8.7□□□□□ -1.02
CHD6-201ENST00000309279 ASPAP45381 313 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 NDUFV1P49821 464 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 CLCN4P51793 760 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 TNNC1P63316 161 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 NFKB2Q00653 900 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 LMNB2Q03252 620 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 HYAL1Q12794 435 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 CTC1Q2NKJ3 1217 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 MAP7D1Q3KQU3 841 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 PREPLQ4J6C6 727 aaPredicted RBP8.7□□□□□ -1.02
CHD6-201ENST00000309279 CTXN3Q4LDR2 81 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 WDR44Q5JSH3 913 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 SPOPLQ6IQ16 392 aa8.7□□□□□ -1.02
CHD6-201ENST00000309279 LILRA6Q6PI73 481 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms