RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 BCCIPQ9P287 314 aaKnown RBP eCLIP23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 ARVCFO00192 962 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 ITGB1P05556 798 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 YY1P25490 414 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 SDC4P31431 198 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 PTK6Q13882 451 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 ACAP1Q15027 740 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 CYP4V2Q6ZWL3 525 aaPredicted RBP23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 ZNF598Q86UK7 904 aaKnown RBP23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 GRK7Q8WTQ7 553 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 FAM172AQ8WUF8 416 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 LINC01599Q8WXQ3 324 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 SYT15Q9BQS2 421 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 CALN1Q9BXU9 219 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 DUSP16Q9BY84 665 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 DNAI2Q9GZS0 605 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 KBTBD13C9JR72 458 aa23.5■■□□□ 1.35
PDLIM2-202ENST00000308354 GAS8O95995 478 aa23.5■■□□□ 1.35
PDLIM2-202ENST00000308354 PCK1P35558 622 aa23.5■■□□□ 1.35
PDLIM2-202ENST00000308354 SKIDA1Q1XH10 827 aa23.5■■□□□ 1.35
PDLIM2-202ENST00000308354 DENND2CQ68D51 928 aa23.5■■□□□ 1.35
PDLIM2-202ENST00000308354 ADAM33Q9BZ11 813 aa23.5■■□□□ 1.35
PDLIM2-202ENST00000308354 HOMER3Q9NSC5 361 aa23.5■■□□□ 1.35
PDLIM2-202ENST00000308354 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.5■■□□□ 1.35
PDLIM2-202ENST00000308354 WHRNQ9P202 907 aa23.5■■□□□ 1.35
PDLIM2-202ENST00000308354 LIASO43766 372 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 NUDT17P0C025 328 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 MAP3K7CLP57077 242 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 SNX16P57768 344 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 ADIGQ0VDE8 80 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 MMRN1Q13201 1228 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 ARHGEF6Q15052 776 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 RGS18Q9NS28 235 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 GPATCH2LQ9NWQ4 482 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 SQORQ9Y6N5 450 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 XPO1O14980 1071 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 EIF3HO15372 352 aaKnown RBP eCLIP23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 PRPSAP2O60256 369 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 CST8O60676 142 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 NPR3P17342 541 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 IVDP26440 423 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 LHX1P48742 406 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 NDUFV1P49821 464 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 ATXN1P54253 815 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 EIF3BP55884 814 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 GRIK3Q13003 919 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 SLC29A2Q14542 456 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 EMC10Q5UCC4 262 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 CD300LGQ6UXG3 332 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 CLEC20AQ6ZU45 233 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 SYDE1Q6ZW31 735 aaPredicted RBP23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 GSTA5Q7RTV2 222 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 CCDC25Q86WR0 208 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 TMEM86AQ8N2M4 240 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 CMASQ8NFW8 434 aaPredicted RBP23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 PCED1BQ96HM7 432 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 KRT82Q9NSB4 513 aa23.49■■□□□ 1.35
PDLIM2-202ENST00000308354 B4GALT3O60512 393 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 CAND2O75155 1236 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 PTPN7P35236 360 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 GUCY1A3Q02108 690 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 TUSC3Q13454 348 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 BYSLQ13895 437 aaKnown RBP23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 ZDHHC17Q8IUH5 632 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 GLIS1Q8NBF1 620 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 SNF8Q96H20 258 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 CALCOCO1Q9P1Z2 691 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 FEZ2Q9UHY8 353 aaPredicted RBP23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 PHF24Q9UPV7 400 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 ZNF148Q9UQR1 794 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 DCDC2CA8MYV0 355 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 C9IYK1 514 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 RPL34P49207 117 aaKnown RBP23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 PLCB3Q01970 1234 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 MTFR1Q15390 333 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 SLC26A9Q7LBE3 791 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 HSFY1Q96LI6 401 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 KCNK16Q96T55 309 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 RHOBTB2Q9BYZ6 727 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 FAM129AQ9BZQ8 928 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 RABEP2Q9H5N1 569 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 C10orf88Q9H8K7 445 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 TMEM30AQ9NV96 361 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 NEU2Q9Y3R4 380 aa23.48■■□□□ 1.35
PDLIM2-202ENST00000308354 IVLP07476 585 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 SKIP12755 728 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 ADCY8P40145 1251 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 CACNA2D1P54289 1103 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 CDH6P55285 790 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 SLC8A3P57103 927 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 PPARDQ03181 441 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 SLMAPQ14BN4 828 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 ZC3H12AQ5D1E8 599 aaKnown RBP23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 AGBL2Q5U5Z8 902 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 SLC24A5Q71RS6 500 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 ZNF280BQ86YH2 543 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 RTP3Q9BQQ7 232 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 UBN1Q9NPG3 1134 aa23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 NOVA2Q9UNW9 492 aaKnown RBP23.47■■□□□ 1.35
PDLIM2-202ENST00000308354 DPYSL4O14531 572 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms