RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 RPL10AP62906 217 aaKnown RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 CYTH1Q15438 398 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 TTLL9Q3SXZ7 439 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 SLC35C1Q96A29 364 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 L1RE1Q9UN81 338 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 FAM32AQ9Y421 112 aaKnown RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 H2AFYO75367 372 aaKnown RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 HSPA1AP0DMV8 641 aaKnown RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 HSPA1BP0DMV9 641 aaKnown RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 ALDH5A1P51649 535 aaPredicted RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 MAP3K10Q02779 954 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 GRIK4Q16099 956 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 AASDHQ4L235 1098 aaPredicted RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 GRAMD4Q6IC98 578 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 HS6ST3Q8IZP7 471 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 MAGEB18Q96M61 343 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 RASSF10A6NK89 507 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 EML1O00423 815 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 SEC24DO94855 1032 aaPredicted RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 CYP3A4P08684 503 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 PTPN7P35236 360 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 FBXW4P57775 412 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 CTXN3Q4LDR2 81 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 ZC3H12BQ5HYM0 836 aaKnown RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 AARS2Q5JTZ9 985 aaKnown RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 CERS5Q8N5B7 392 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 SGF29Q96ES7 293 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 KCTD10Q9H3F6 313 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 LOC100653049A0A140TA62 436 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 PDHXO00330 501 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 KRT34O76011 436 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 BFSP2Q13515 415 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 ZPBP2Q6X784 338 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 REPS2Q8NFH8 660 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 WNK4Q96J92 1243 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 P2RX7Q99572 595 aaKnown RBP16.49■□□□□ 0.23
USP42-201ENST00000306177 MRIQ9BWK5 157 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 NEUROG2Q9H2A3 272 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 SETD4Q9NVD3 440 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 INTS13Q9NVM9 706 aa16.49■□□□□ 0.23
USP42-201ENST00000306177 ADM5C9JUS6 153 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 PTENP60484 403 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 POLD3Q15054 466 aaPredicted RBP16.48■□□□□ 0.23
USP42-201ENST00000306177 LRRC36Q1X8D7 754 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 NBPF20Q3BBV1 942 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.48■□□□□ 0.23
USP42-201ENST00000306177 MKL1Q969V6 931 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 MTMR8Q96EF0 704 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 DMGDHQ9UI17 866 aaKnown RBP16.48■□□□□ 0.23
USP42-201ENST00000306177 CAMTA1Q9Y6Y1 1673 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 FAM95CA0A1B0GW59 222 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 CSDE1O75534 798 aaKnown RBP16.48■□□□□ 0.23
USP42-201ENST00000306177 DENND1BQ6P3S1 775 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 ZNF606Q8WXB4 792 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 CCDC126Q96EE4 140 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 PAFAH2Q99487 392 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 SLC7A5P2Q9GIP4 190 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 ADCY3O60266 1144 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 ATP6V1E1P36543 226 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 COPAP53621 1224 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 MAP1SQ66K74 1059 aaPredicted RBP16.48■□□□□ 0.23
USP42-201ENST00000306177 CAPRIN2Q6IMN6 1127 aaKnown RBP16.48■□□□□ 0.23
USP42-201ENST00000306177 ARHGEF19Q8IW93 802 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 VCPIP1Q96JH7 1222 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 ADNPQ9H2P0 1102 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 ASB7Q9H672 318 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 CCDC134Q9H6E4 229 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 SNTG2Q9NY99 539 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 CLCA2Q9UQC9 943 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 IGF2BP3O00425 579 aaKnown RBP eCLIP16.48■□□□□ 0.23
USP42-201ENST00000306177 STRNO43815 780 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 CNTFP26441 200 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 SLC12A3P55017 1021 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 PTF1AQ7RTS3 328 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 CLEC4FQ8N1N0 589 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 CAVIN3Q969G5 261 aa16.48■□□□□ 0.23
USP42-201ENST00000306177 TMEM150BA6NC51 233 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 ASS1P00966 412 aaKnown RBP16.47■□□□□ 0.23
USP42-201ENST00000306177 TKTL1P51854 596 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 DYNC1I2Q13409 638 aaKnown RBP16.47■□□□□ 0.23
USP42-201ENST00000306177 TRIP10Q15642 601 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 KCNK18Q7Z418 384 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 MTMR9Q96QG7 549 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 PAN2Q504Q3 1202 aaKnown RBP16.47■□□□□ 0.23
USP42-201ENST00000306177 SLC26A11Q86WA9 606 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 FAR2Q96K12 515 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 SPATA16Q9BXB7 569 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 ASCC2Q9H1I8 757 aaPredicted RBP16.47■□□□□ 0.23
USP42-201ENST00000306177 VTA1Q9NP79 307 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 SLC24A2Q9UI40 661 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 CAND2O75155 1236 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 DGKIO75912 1065 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 TCN1P20061 433 aaPredicted RBP16.47■□□□□ 0.23
USP42-201ENST00000306177 OXCT1P55809 520 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 CCDC15Q0P6D6 951 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 OVGP1Q12889 678 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 KBTBD12Q3ZCT8 623 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 CCDC33Q8N5R6 958 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 ARRDC4Q8NCT1 418 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 VPS37AQ8NEZ2 397 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms