RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 DDX42Q86XP3 938 aaKnown RBP eCLIP27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 SYNPOQ8N3V7 929 aa27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 HEXIM2Q96MH2 286 aaKnown RBP27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 ECT2Q9H8V3 914 aa27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 CHORDC1Q9UHD1 332 aaPredicted RBP27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 CPQQ9Y646 472 aa27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 R4GN57 208 aa27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 F5P12259 2224 aa27.97■■■□□ 2.07
CDKN2A-201ENST00000304494 OTOL1A6NHN0 477 aaPredicted RBP27.96■■■□□ 2.07
CDKN2A-201ENST00000304494 GRSF1Q12849 480 aaKnown RBP eCLIP27.96■■■□□ 2.07
CDKN2A-201ENST00000304494 NR1H3Q13133 447 aa27.96■■■□□ 2.07
CDKN2A-201ENST00000304494 CCINQ13939 588 aa27.96■■■□□ 2.07
CDKN2A-201ENST00000304494 HECTD3Q5T447 861 aa27.96■■■□□ 2.07
CDKN2A-201ENST00000304494 ASCL5Q7RTU5 278 aa27.96■■■□□ 2.07
CDKN2A-201ENST00000304494 TATDN2Q93075 761 aa27.96■■■□□ 2.07
CDKN2A-201ENST00000304494 TMEM176AQ96HP8 235 aa27.96■■■□□ 2.07
CDKN2A-201ENST00000304494 KIAA1468Q9P260 1216 aa27.96■■■□□ 2.07
CDKN2A-201ENST00000304494 HELZP42694 1942 aaKnown RBP27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 GNA14O95837 355 aa27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 ZDHHC11BP0C7U3 371 aa27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 MBL2P11226 248 aaPredicted RBP27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 YWHAEP62258 255 aaKnown RBP27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 ZXDBP98169 803 aa27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 EML3Q32P44 896 aa27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 SPEM1Q8N4L4 309 aa27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 ARID3AQ99856 593 aa27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 FAM126AQ9BYI3 521 aaPredicted RBP27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 TLR8Q9NR97 1041 aaKnown RBP27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 RBM12Q9NTZ6 932 aaKnown RBP27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 GMIPQ9P107 970 aa27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 PCDHGA2Q9Y5H1 932 aa27.95■■■□□ 2.06
CDKN2A-201ENST00000304494 TRDMT1O14717 391 aaKnown RBP27.94■■■□□ 2.06
CDKN2A-201ENST00000304494 PMM2O15305 246 aa27.94■■■□□ 2.06
CDKN2A-201ENST00000304494 NFATC1O95644 943 aa27.94■■■□□ 2.06
CDKN2A-201ENST00000304494 GJA4P35212 333 aa27.94■■■□□ 2.06
CDKN2A-201ENST00000304494 FMO5P49326 533 aa27.94■■■□□ 2.06
CDKN2A-201ENST00000304494 CETN1Q12798 172 aa27.94■■■□□ 2.06
CDKN2A-201ENST00000304494 CUL2Q13617 745 aa27.94■■■□□ 2.06
CDKN2A-201ENST00000304494 TMEM196Q5HYL7 178 aa27.94■■■□□ 2.06
CDKN2A-201ENST00000304494 PPP1R26Q5T8A7 1209 aaPredicted RBP27.94■■■□□ 2.06
CDKN2A-201ENST00000304494 SMPD4Q9NXE4 827 aa27.94■■■□□ 2.06
CDKN2A-201ENST00000304494 SLC9A3R1O14745 358 aaPredicted RBP27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 COCHO43405 550 aa27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 TBXAS1P24557 533 aaPredicted RBP27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 CXCL12P48061 93 aa27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 RAD23BP54727 409 aa27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 NRLP54845 237 aa27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 CAMK4Q16566 473 aa27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 SLC4A11Q8NBS3 891 aa27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 ATRIPQ8WXE1 791 aa27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 DUSP16Q9BY84 665 aa27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 NACA2Q9H009 215 aa27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 ZSCAN32Q9NX65 697 aa27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 SCML2Q9UQR0 700 aa27.93■■■□□ 2.06
CDKN2A-201ENST00000304494 HHLA1C9JL84 531 aa27.92■■■□□ 2.06
CDKN2A-201ENST00000304494 FGFR1OPO95684 399 aaKnown RBP27.92■■■□□ 2.06
CDKN2A-201ENST00000304494 LMNAP02545 664 aaKnown RBP27.92■■■□□ 2.06
CDKN2A-201ENST00000304494 STX17P56962 302 aa27.92■■■□□ 2.06
CDKN2A-201ENST00000304494 GAS6Q14393 721 aa27.92■■■□□ 2.06
CDKN2A-201ENST00000304494 TSSK4Q6SA08 328 aa27.92■■■□□ 2.06
CDKN2A-201ENST00000304494 NELL1Q92832 810 aa27.92■■■□□ 2.06
CDKN2A-201ENST00000304494 JAKMIP2Q96AA8 810 aa27.92■■■□□ 2.06
CDKN2A-201ENST00000304494 CHFRQ96EP1 664 aa27.92■■■□□ 2.06
CDKN2A-201ENST00000304494 LINC00597Q9H2U6 94 aa27.92■■■□□ 2.06
CDKN2A-201ENST00000304494 CFAP97Q9P2B7 532 aa27.92■■■□□ 2.06
CDKN2A-201ENST00000304494 CACNA1IQ9P0X4 2223 aa27.92■■■□□ 2.06
CDKN2A-201ENST00000304494 P4HA2O15460 535 aa27.91■■■□□ 2.06
CDKN2A-201ENST00000304494 ACO1P21399 889 aaKnown RBP27.91■■■□□ 2.06
CDKN2A-201ENST00000304494 DRD1P21728 446 aa27.91■■■□□ 2.06
CDKN2A-201ENST00000304494 Q6ZS52 159 aa27.91■■■□□ 2.06
CDKN2A-201ENST00000304494 GPRIN1Q7Z2K8 1008 aa27.91■■■□□ 2.06
CDKN2A-201ENST00000304494 P2RY13Q9BPV8 354 aa27.91■■■□□ 2.06
CDKN2A-201ENST00000304494 CCSER2Q9H7U1 834 aa27.91■■■□□ 2.06
CDKN2A-201ENST00000304494 E2F8A0AVK6 867 aa27.9■■■□□ 2.06
CDKN2A-201ENST00000304494 TLR5O60602 858 aa27.9■■■□□ 2.06
CDKN2A-201ENST00000304494 MARSP56192 900 aaKnown RBP27.9■■■□□ 2.06
CDKN2A-201ENST00000304494 SLC8A3P57103 927 aa27.9■■■□□ 2.06
CDKN2A-201ENST00000304494 ARHGAP17Q68EM7 881 aa27.9■■■□□ 2.06
CDKN2A-201ENST00000304494 FSTL4Q6MZW2 842 aa27.9■■■□□ 2.06
CDKN2A-201ENST00000304494 ZBTB44Q8NCP5 570 aa27.9■■■□□ 2.06
CDKN2A-201ENST00000304494 NT5C1BQ96P26 610 aa27.9■■■□□ 2.06
CDKN2A-201ENST00000304494 SRRTQ9BXP5 876 aaKnown RBP27.9■■■□□ 2.06
CDKN2A-201ENST00000304494 TBC1D14Q9P2M4 693 aa27.9■■■□□ 2.06
CDKN2A-201ENST00000304494 PAPSS2O95340 614 aaPredicted RBP27.89■■■□□ 2.06
CDKN2A-201ENST00000304494 CCDC192P0DO97 292 aa27.89■■■□□ 2.06
CDKN2A-201ENST00000304494 GALK1P51570 392 aa27.89■■■□□ 2.06
CDKN2A-201ENST00000304494 SATB1Q01826 763 aa27.89■■■□□ 2.06
CDKN2A-201ENST00000304494 LRMPQ12912 555 aa27.89■■■□□ 2.06
CDKN2A-201ENST00000304494 TRIM59Q8IWR1 403 aa27.89■■■□□ 2.06
CDKN2A-201ENST00000304494 CD101Q93033 1021 aa27.89■■■□□ 2.06
CDKN2A-201ENST00000304494 UBXN6Q9BZV1 441 aa27.89■■■□□ 2.06
CDKN2A-201ENST00000304494 RWDD2AQ9UIY3 292 aa27.89■■■□□ 2.06
CDKN2A-201ENST00000304494 ZFHX2Q9C0A1 2572 aaPredicted RBP27.89■■■□□ 2.05
CDKN2A-201ENST00000304494 CYP26A1O43174 497 aa27.88■■■□□ 2.05
CDKN2A-201ENST00000304494 TDGF1P13385 188 aa27.88■■■□□ 2.05
CDKN2A-201ENST00000304494 KIF11P52732 1056 aa27.88■■■□□ 2.05
CDKN2A-201ENST00000304494 FBXO43Q4G163 708 aa27.88■■■□□ 2.05
CDKN2A-201ENST00000304494 ADGRG2Q8IZP9 1017 aa27.88■■■□□ 2.05
CDKN2A-201ENST00000304494 ANKRD52Q8NB46 1076 aa27.88■■■□□ 2.05
CDKN2A-201ENST00000304494 ZFRQ96KR1 1074 aaKnown RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms