RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 APOBEC3GQ9HC16 384 aaKnown RBP11.51□□□□□ -0.57
HMGN1P35-201ENST00000303758 COMMD8Q9NX08 183 aa11.51□□□□□ -0.57
HMGN1P35-201ENST00000303758 SMG5Q9UPR3 1016 aaKnown RBP11.51□□□□□ -0.57
HMGN1P35-201ENST00000303758 ZNF292O60281 2723 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 TRIM49BA6NDI0 452 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 OTOL1A6NHN0 477 aaPredicted RBP11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 TRDMT1O14717 391 aaKnown RBP11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 SLC9A3R1O14745 358 aaPredicted RBP11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 RNF40O75150 1001 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 OLFM2O95897 454 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 EGFP01133 1207 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 PPP1R2P41236 205 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 ZNF394Q53GI3 561 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 HEATR6Q6AI08 1181 aaKnown RBP11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 ANKRD40Q6AI12 368 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 ISM2Q6H9L7 571 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 FSTL4Q6MZW2 842 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 PRR23BQ6ZRT6 265 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 PAQR9Q6ZVX9 377 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 FILIP1Q7Z7B0 1213 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 KIAA2013Q8IYS2 634 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 TTC39CQ8N584 583 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 CD101Q93033 1021 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 CHFRQ96EP1 664 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 CYFIP2Q96F07 1278 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 TWNKQ96RR1 684 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 SMOQ99835 787 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 RNF38Q9H0F5 515 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 EPC1Q9H2F5 836 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 TLR8Q9NR97 1041 aaKnown RBP11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 RAB20Q9NX57 234 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 GMIPQ9P107 970 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 CFAP97Q9P2B7 532 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 CHORDC1Q9UHD1 332 aaPredicted RBP11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 GMEB2Q9UKD1 530 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 SLC8A2Q9UPR5 921 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 SH3BP1Q9Y3L3 701 aa11.5□□□□□ -0.57
HMGN1P35-201ENST00000303758 CHURC1-FNTBB4DL54 471 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 TNFRSF10BO14763 440 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 SCAMP3O14828 347 aaKnown RBP11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 LILRB5O75023 590 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 CILPO75339 1184 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 BEST1O76090 585 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 PAPSS2O95340 614 aaPredicted RBP11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 IRF1P10914 325 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 TDGF1P13385 188 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 FNTBP49356 437 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 TUBP50607 506 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 GALK1P51570 392 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 CCDC40Q4G0X9 1142 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 FBXO43Q4G163 708 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 KLHL10Q6JEL2 608 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 CLEC20AQ6ZU45 233 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 LONP2Q86WA8 852 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 SUMF1Q8NBK3 374 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 ZMIZ2Q8NF64 920 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 CCDC26Q8TAB7 109 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 SPATA20Q8TB22 786 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 NELL1Q92832 810 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 HNRNPABQ99729 332 aaKnown RBP11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 LINC00597Q9H2U6 94 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 CCSER2Q9H7U1 834 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 CSNK1G1Q9HCP0 422 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 ARMCX3Q9UH62 379 aaPredicted RBP11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 CIZ1Q9ULV3 898 aaPredicted RBP11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 DMXL1Q9Y485 3027 aa11.49□□□□□ -0.57
HMGN1P35-201ENST00000303758 ATG2BQ96BY7 2078 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 COCHO43405 550 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 TLR5O60602 858 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 ADH1CP00326 375 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 ACO1P21399 889 aaKnown RBP11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 PMS1P54277 932 aaKnown RBP11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 SLC8A3P57103 927 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 YWHAEP62258 255 aaKnown RBP11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 ZXDBP98169 803 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 GOLGA8FQ08AF8 430 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 GOLGA8DPQ0D2H9 430 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 SIM2Q14190 667 aaPredicted RBP11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 LPAL2Q16609 132 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 CEP68Q76N32 757 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 ELOA2Q8IYF1 753 aaPredicted RBP11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 DCLK2Q8N568 766 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 KIAA1958Q8N8K9 716 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 RPLP0P6Q8NHW5 317 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 SEMA4DQ92854 862 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 ACDQ96AP0 544 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 DHTKD1Q96HY7 919 aaPredicted RBP11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 FAXDC2Q96IV6 333 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 HEXIM2Q96MH2 286 aaKnown RBP11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 METTL14Q9HCE5 456 aaKnown RBP11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 CISHQ9NSE2 258 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 TBC1D14Q9P2M4 693 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 MAN1B1Q9UKM7 699 aa11.48□□□□□ -0.57
HMGN1P35-201ENST00000303758 FAM186AA6NE01 2351 aa11.47□□□□□ -0.57
HMGN1P35-201ENST00000303758 E2F8A0AVK6 867 aa11.47□□□□□ -0.57
HMGN1P35-201ENST00000303758 BICDL2A1A5D9 508 aa11.47□□□□□ -0.57
HMGN1P35-201ENST00000303758 FAM92AA1XBS5 289 aa11.47□□□□□ -0.57
HMGN1P35-201ENST00000303758 K7ESF4 209 aa11.47□□□□□ -0.57
HMGN1P35-201ENST00000303758 CYP26A1O43174 497 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms