RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 IL9P15248 144 aa25.77■■□□□ 1.72
HOXC9-201ENST00000303450 TNFAIP3P21580 790 aa25.77■■□□□ 1.72
HOXC9-201ENST00000303450 CDH5P33151 784 aaPredicted RBP25.77■■□□□ 1.72
HOXC9-201ENST00000303450 PPP3CCP48454 512 aa25.77■■□□□ 1.72
HOXC9-201ENST00000303450 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.77■■□□□ 1.72
HOXC9-201ENST00000303450 TMEM150AQ86TG1 271 aa25.77■■□□□ 1.72
HOXC9-201ENST00000303450 PDZD8Q8NEN9 1154 aa25.77■■□□□ 1.72
HOXC9-201ENST00000303450 PPP1R13BQ96KQ4 1090 aa25.77■■□□□ 1.72
HOXC9-201ENST00000303450 PHF7Q9BWX1 381 aaPredicted RBP25.77■■□□□ 1.72
HOXC9-201ENST00000303450 SLC4A5Q9BY07 1137 aa25.77■■□□□ 1.72
HOXC9-201ENST00000303450 CYLDQ9NQC7 956 aa25.77■■□□□ 1.72
HOXC9-201ENST00000303450 ABHD10Q9NUJ1 306 aa25.77■■□□□ 1.72
HOXC9-201ENST00000303450 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.77■■□□□ 1.72
HOXC9-201ENST00000303450 CHORDC1Q9UHD1 332 aaPredicted RBP25.77■■□□□ 1.72
HOXC9-201ENST00000303450 DENND4AQ7Z401 1863 aa25.76■■□□□ 1.71
HOXC9-201ENST00000303450 MOSPD3O75425 235 aa25.76■■□□□ 1.71
HOXC9-201ENST00000303450 ZBED1O96006 694 aa25.76■■□□□ 1.71
HOXC9-201ENST00000303450 CEBPBP17676 345 aa25.76■■□□□ 1.71
HOXC9-201ENST00000303450 HNRNPH3P31942 346 aaKnown RBP25.76■■□□□ 1.71
HOXC9-201ENST00000303450 RPL34P49207 117 aaKnown RBP25.76■■□□□ 1.71
HOXC9-201ENST00000303450 TEAD2Q15562 447 aa25.76■■□□□ 1.71
HOXC9-201ENST00000303450 ARHGAP15Q53QZ3 475 aa25.76■■□□□ 1.71
HOXC9-201ENST00000303450 CCDC186Q7Z3E2 898 aa25.76■■□□□ 1.71
HOXC9-201ENST00000303450 ZNF571Q7Z3V5 609 aaPredicted RBP25.76■■□□□ 1.71
HOXC9-201ENST00000303450 OVCA2Q8WZ82 227 aa25.76■■□□□ 1.71
HOXC9-201ENST00000303450 MRPS31Q92665 395 aaKnown RBP25.76■■□□□ 1.71
HOXC9-201ENST00000303450 ULBP1Q9BZM6 244 aa25.76■■□□□ 1.71
HOXC9-201ENST00000303450 SYNCQ9H7C4 482 aa25.76■■□□□ 1.71
HOXC9-201ENST00000303450 GMIPQ9P107 970 aa25.76■■□□□ 1.71
HOXC9-201ENST00000303450 MYO16Q9Y6X6 1858 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 C5orf42Q9H799 3197 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 ABL1P00519 1130 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 CYP1A1P04798 512 aaPredicted RBP25.75■■□□□ 1.71
HOXC9-201ENST00000303450 GBP2P32456 591 aaPredicted RBP25.75■■□□□ 1.71
HOXC9-201ENST00000303450 SNX16P57768 344 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 NOMO3P69849 1222 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 CYP4F8P98187 520 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 ARID5BQ14865 1188 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 NAA35Q5VZE5 725 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 HGSNATQ68CP4 663 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 TMEM110Q86TL2 294 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 CPA5Q8WXQ8 436 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 FGF13Q92913 245 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 CPXM1Q96SM3 734 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 PCDHB18PQ96TA0 734 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 SLITRK6Q9H5Y7 841 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 CNGB3Q9NQW8 809 aa25.75■■□□□ 1.71
HOXC9-201ENST00000303450 E5RJQ4 531 aa25.74■■□□□ 1.71
HOXC9-201ENST00000303450 NRG2O14511 850 aaPredicted RBP25.74■■□□□ 1.71
HOXC9-201ENST00000303450 TADA3O75528 432 aa25.74■■□□□ 1.71
HOXC9-201ENST00000303450 GABBR2O75899 941 aa25.74■■□□□ 1.71
HOXC9-201ENST00000303450 SP100P23497 879 aaPredicted RBP25.74■■□□□ 1.71
HOXC9-201ENST00000303450 MRE11P49959 708 aa25.74■■□□□ 1.71
HOXC9-201ENST00000303450 PM20D1Q6GTS8 502 aa25.74■■□□□ 1.71
HOXC9-201ENST00000303450 OTOP3Q7RTS5 596 aa25.74■■□□□ 1.71
HOXC9-201ENST00000303450 SPC24Q8NBT2 197 aa25.74■■□□□ 1.71
HOXC9-201ENST00000303450 MSANTD4Q8NCY6 345 aa25.74■■□□□ 1.71
HOXC9-201ENST00000303450 IPO4Q8TEX9 1081 aaKnown RBP25.74■■□□□ 1.71
HOXC9-201ENST00000303450 ASB2Q96Q27 587 aa25.74■■□□□ 1.71
HOXC9-201ENST00000303450 SYT11Q9BT88 431 aa25.74■■□□□ 1.71
HOXC9-201ENST00000303450 MIS12Q9H081 205 aa25.74■■□□□ 1.71
HOXC9-201ENST00000303450 TLR8Q9NR97 1041 aaKnown RBP25.74■■□□□ 1.71
HOXC9-201ENST00000303450 NCANO14594 1321 aa25.74■■□□□ 1.71
HOXC9-201ENST00000303450 FAM170AA1A519 330 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 ZNF840PA6NDX5 716 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 FBXO21O94952 628 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 GSE1Q14687 1217 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 CLEC16AQ2KHT3 1053 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 VPS36Q86VN1 386 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 MON1AQ86VX9 555 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 ERICH1Q86X53 443 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 SCUBE3Q8IX30 993 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 NPAS3Q8IXF0 933 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 ACSF2Q96CM8 615 aaPredicted RBP25.73■■□□□ 1.71
HOXC9-201ENST00000303450 CDH7Q9ULB5 785 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 USTQ9Y2C2 406 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 NR2E1Q9Y466 385 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 DENND4CQ5VZ89 1909 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 OBSL1O75147 1896 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 PTPN20Q4JDL3 420 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 GPR158Q5T848 1215 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 WDR59Q6PJI9 974 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 SCML4Q8N228 414 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 TC2NQ8N9U0 490 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 NDRG1Q92597 394 aaKnown RBP25.73■■□□□ 1.71
HOXC9-201ENST00000303450 MCRS1Q96EZ8 462 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 RPGRIP1Q96KN7 1286 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 MYADMQ96S97 322 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.73■■□□□ 1.71
HOXC9-201ENST00000303450 GDE1Q9NZC3 331 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 IMPACTQ9P2X3 320 aa25.73■■□□□ 1.71
HOXC9-201ENST00000303450 GOLGA6L6A8MZA4 724 aa25.72■■□□□ 1.71
HOXC9-201ENST00000303450 PLEKP08567 350 aaPredicted RBP25.72■■□□□ 1.71
HOXC9-201ENST00000303450 UNGP13051 313 aaPredicted RBP25.72■■□□□ 1.71
HOXC9-201ENST00000303450 DDX6P26196 483 aaKnown RBP eCLIP25.72■■□□□ 1.71
HOXC9-201ENST00000303450 NSFP46459 744 aaKnown RBP25.72■■□□□ 1.71
HOXC9-201ENST00000303450 STXBP5Q5T5C0 1151 aa25.72■■□□□ 1.71
HOXC9-201ENST00000303450 TXNDC8Q6A555 127 aa25.72■■□□□ 1.71
HOXC9-201ENST00000303450 ARHGAP18Q8N392 663 aa25.72■■□□□ 1.71
HOXC9-201ENST00000303450 SLC30A5Q8TAD4 765 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms