RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PTPN1P18031 435 aaKnown RBP20.3■□□□□ 0.84
HOXC4-201ENST00000303406 TGM2P21980 687 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 VPS41P49754 854 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 PLCB3Q01970 1234 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 SP3Q02447 781 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 TRIM32Q13049 653 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 NOMO1Q15155 1222 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 DNAJC21Q5F1R6 531 aaKnown RBP20.3■□□□□ 0.84
HOXC4-201ENST00000303406 ZNF618Q5T7W0 954 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 RNASEH2BQ5TBB1 312 aaKnown RBP20.3■□□□□ 0.84
HOXC4-201ENST00000303406 STRADAQ7RTN6 431 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 SCUBE3Q8IX30 993 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 ZFP42Q96MM3 310 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 CFAP57Q96MR6 1250 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 TTC25Q96NG3 672 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 SERPINB12Q96P63 405 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 RNF157Q96PX1 679 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 ZNF670Q9BS34 389 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 UBN1Q9NPG3 1134 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 NINJ2Q9NZG7 142 aa20.3■□□□□ 0.84
HOXC4-201ENST00000303406 BCCIPQ9P287 314 aaKnown RBP eCLIP20.3■□□□□ 0.84
HOXC4-201ENST00000303406 SGK1O00141 431 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 RASGRF2O14827 1237 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 RGS16O15492 202 aaPredicted RBP20.29■□□□□ 0.84
HOXC4-201ENST00000303406 HCRTO43612 131 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 CTSHP09668 335 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 PRKAR2AP13861 404 aaKnown RBP20.29■□□□□ 0.84
HOXC4-201ENST00000303406 CCND3P30281 292 aaPredicted RBP20.29■□□□□ 0.84
HOXC4-201ENST00000303406 STIP1P31948 543 aaKnown RBP20.29■□□□□ 0.84
HOXC4-201ENST00000303406 MLH1P40692 756 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 ATP1A2P50993 1020 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 MAGOHP61326 146 aaKnown RBP20.29■□□□□ 0.84
HOXC4-201ENST00000303406 GPS1Q13098 491 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 KRT81Q14533 505 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 TAF5Q15542 800 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 PTGISQ16647 500 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 CCDC142Q17RM4 750 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 SH3PXD2AQ5TCZ1 1133 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 CYP4F22Q6NT55 531 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 GLIS1Q8NBF1 620 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 HAUS1Q96CS2 278 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 SENP8Q96LD8 212 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 GAD1Q99259 594 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 TMEM121Q9BTD3 319 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 CALN1Q9BXU9 219 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 PRDM16Q9HAZ2 1276 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 CALCOCO1Q9P1Z2 691 aa20.29■□□□□ 0.84
HOXC4-201ENST00000303406 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.28■□□□□ 0.84
HOXC4-201ENST00000303406 GRAP2O75791 330 aa20.28■□□□□ 0.84
HOXC4-201ENST00000303406 NPR3P17342 541 aa20.28■□□□□ 0.84
HOXC4-201ENST00000303406 HOXD10P28358 340 aa20.28■□□□□ 0.84
HOXC4-201ENST00000303406 HDAC4P56524 1084 aa20.28■□□□□ 0.84
HOXC4-201ENST00000303406 EIF3EP60228 445 aaKnown RBP20.28■□□□□ 0.84
HOXC4-201ENST00000303406 DYNLT1P63172 113 aa20.28■□□□□ 0.84
HOXC4-201ENST00000303406 MAP3K21Q5TCX8 1036 aa20.28■□□□□ 0.84
HOXC4-201ENST00000303406 AGMOQ6ZNB7 445 aa20.28■□□□□ 0.84
HOXC4-201ENST00000303406 FUKQ8N0W3 1084 aa20.28■□□□□ 0.84
HOXC4-201ENST00000303406 RSAD2Q8WXG1 361 aa20.28■□□□□ 0.84
HOXC4-201ENST00000303406 PGBD4Q96DM1 585 aa20.28■□□□□ 0.84
HOXC4-201ENST00000303406 LPIN3Q9BQK8 851 aa20.28■□□□□ 0.84
HOXC4-201ENST00000303406 AGO3Q9H9G7 860 aaKnown RBP20.28■□□□□ 0.84
HOXC4-201ENST00000303406 PCDH18Q9HCL0 1135 aa20.28■□□□□ 0.84
HOXC4-201ENST00000303406 NGRNQ9NPE2 291 aaKnown RBP20.28■□□□□ 0.84
HOXC4-201ENST00000303406 FARP1Q9Y4F1 1045 aaPredicted RBP20.28■□□□□ 0.84
HOXC4-201ENST00000303406 CFAP69A5D8W1 941 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 ARL5CA6NH57 179 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 DAB1O75553 588 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 TKTP29401 623 aaKnown RBP20.27■□□□□ 0.84
HOXC4-201ENST00000303406 ATP5DP30049 168 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 THPOP40225 353 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 STAT4Q14765 748 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 DPYSL2Q16555 572 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 CDO1Q16878 200 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 TRIM71Q2Q1W2 868 aaKnown RBP20.27■□□□□ 0.84
HOXC4-201ENST00000303406 WSCD1Q658N2 575 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 SLC9A4Q6AI14 798 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 PSTKQ8IV42 348 aaKnown RBP20.27■□□□□ 0.84
HOXC4-201ENST00000303406 CENPTQ96BT3 561 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 SNRNP25Q9BV90 132 aaKnown RBP20.27■□□□□ 0.84
HOXC4-201ENST00000303406 B3GNT5Q9BYG0 378 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.27■□□□□ 0.84
HOXC4-201ENST00000303406 PADI3Q9ULW8 664 aa20.27■□□□□ 0.84
HOXC4-201ENST00000303406 A0A0U1RQF3 1178 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 TOMM70O94826 608 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 ZSCAN5DPP0CG00 497 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 HPDP32754 393 aaPredicted RBP20.27■□□□□ 0.83
HOXC4-201ENST00000303406 LSP1P33241 339 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 MAGEA4P43358 317 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 ATP11AP98196 1134 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 CBLBQ13191 982 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 AUHQ13825 339 aaKnown RBP20.27■□□□□ 0.83
HOXC4-201ENST00000303406 ERMARDQ5T6L9 678 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 PAXIP1Q6ZW49 1069 aaPredicted RBP20.27■□□□□ 0.83
HOXC4-201ENST00000303406 RNF180Q86T96 592 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 PIGZQ86VD9 579 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 PPIL6Q8IXY8 311 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.27■□□□□ 0.83
HOXC4-201ENST00000303406 PRCCQ92733 491 aaPredicted RBP20.27■□□□□ 0.83
HOXC4-201ENST00000303406 RBM15Q96T37 977 aaKnown RBP eCLIP20.27■□□□□ 0.83
HOXC4-201ENST00000303406 CCDC77Q9BR77 488 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms