RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 KLRC2P26717 231 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 MATKP42679 507 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 EIF3BP55884 814 aaKnown RBP11.09□□□□□ -0.63
CLP1-201ENST00000302731 TFDP2Q14188 446 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 MBTPS1Q14703 1052 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 TAF5Q15542 800 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 UAP1Q16222 522 aaPredicted RBP11.09□□□□□ -0.63
CLP1-201ENST00000302731 C15orf59Q2T9L4 293 aaPredicted RBP11.09□□□□□ -0.63
CLP1-201ENST00000302731 MDH1BQ5I0G3 518 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 KCNT1Q5JUK3 1230 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 KIAA0319Q5VV43 1072 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 RHBDF2Q6PJF5 856 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 CD300LGQ6UXG3 332 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 CLEC20AQ6ZU45 233 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 CEP128Q6ZU80 1094 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 LRRC8DQ7L1W4 858 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 RTN4RL1Q86UN2 441 aaPredicted RBP11.09□□□□□ -0.63
CLP1-201ENST00000302731 ALLCQ8N6M5 410 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 ZNF784Q8NCA9 323 aaPredicted RBP11.09□□□□□ -0.63
CLP1-201ENST00000302731 RNF169Q8NCN4 708 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 FAM172AQ8WUF8 416 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 SUSD3Q96L08 255 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 CFAP57Q96MR6 1250 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 PEBP4Q96S96 227 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 ELAC1Q9H777 363 aaKnown RBP11.09□□□□□ -0.63
CLP1-201ENST00000302731 LRRC4Q9HBW1 653 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLP1-201ENST00000302731 FAN1Q9Y2M0 1017 aa11.09□□□□□ -0.63
CLP1-201ENST00000302731 H0YGN5 161 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 POLR3GO15318 223 aaPredicted RBP11.08□□□□□ -0.64
CLP1-201ENST00000302731 TP73O15350 636 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 CST8O60676 142 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 DAB1O75553 588 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 GRAP2O75791 330 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 KRT14P02533 472 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 NUDT17P0C025 328 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 RARGP13631 454 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 LCP1P13796 627 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 CDH6P55285 790 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 HDAC4P56524 1084 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 MRPS5P82675 430 aaKnown RBP11.08□□□□□ -0.64
CLP1-201ENST00000302731 DSC1Q08554 894 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 ADCY1Q08828 1119 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 TERF2Q15554 542 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 MAPRE1Q15691 268 aaKnown RBP11.08□□□□□ -0.64
CLP1-201ENST00000302731 RAB41Q5JT25 222 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 SH3PXD2AQ5TCZ1 1133 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 FAM171BQ6P995 826 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 FAM35AQ86V20 835 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 PSTKQ8IV42 348 aaKnown RBP11.08□□□□□ -0.64
CLP1-201ENST00000302731 FAM126BQ8IXS8 530 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 URGCPQ8TCY9 931 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 RSPH1Q8WYR4 309 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 HSPH1Q92598 858 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 ACSF2Q96CM8 615 aaPredicted RBP11.08□□□□□ -0.64
CLP1-201ENST00000302731 SMARCD1Q96GM5 515 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 PCED1BQ96HM7 432 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 PAAF1Q9BRP4 392 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 ZNF670Q9BS34 389 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 MED10Q9BTT4 135 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 PABPC3Q9H361 631 aaKnown RBP11.08□□□□□ -0.64
CLP1-201ENST00000302731 PRDM16Q9HAZ2 1276 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 CSNK1G1Q9HCP0 422 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 NGRNQ9NPE2 291 aaKnown RBP11.08□□□□□ -0.64
CLP1-201ENST00000302731 PAK6Q9NQU5 681 aaPredicted RBP11.08□□□□□ -0.64
CLP1-201ENST00000302731 CNGB3Q9NQW8 809 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLP1-201ENST00000302731 PSD3Q9NYI0 1048 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 VPS18Q9P253 973 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 DNPEPQ9ULA0 475 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 ZNF148Q9UQR1 794 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 PLAAQ9Y263 795 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 TRIM17Q9Y577 477 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 NFS1Q9Y697 457 aa11.08□□□□□ -0.64
CLP1-201ENST00000302731 TSC2P49815 1807 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 MYBPHLA2RUH7 354 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 CLDN5O00501 218 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 IGFBP6P24592 240 aaPredicted RBP11.07□□□□□ -0.64
CLP1-201ENST00000302731 NOS2P35228 1153 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 ADCY8P40145 1251 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 PMS2P54278 862 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 YWHAZP63104 245 aaKnown RBP11.07□□□□□ -0.64
CLP1-201ENST00000302731 ATP11AP98196 1134 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 ADIGQ0VDE8 80 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 DPYSL3Q14195 570 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 CDO1Q16878 200 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 SLC25A52Q3SY17 297 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 INTS6LQ5JSJ4 861 aaKnown RBP11.07□□□□□ -0.64
CLP1-201ENST00000302731 ERMARDQ5T6L9 678 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 GSTA5Q7RTV2 222 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 BNIPLQ7Z465 357 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 CROCCP2Q86T23 111 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 SIX6OS1Q8N1H7 587 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 THEM5Q8N1Q8 247 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 SCML4Q8N228 414 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 ACTL9Q8TC94 416 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 UBLCP1Q8WVY7 318 aaPredicted RBP11.07□□□□□ -0.64
CLP1-201ENST00000302731 LINC01599Q8WXQ3 324 aa11.07□□□□□ -0.64
CLP1-201ENST00000302731 RIN2Q8WYP3 895 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms