RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 CCDC33Q8N5R6 958 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 BICD1Q96G01 975 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 TRPM5Q9NZQ8 1165 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 ATXN2Q99700 1313 aaKnown RBP6.91□□□□□ -1.3
ITGB1-201ENST00000302278 CACNA1EQ15878 2313 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 A0A1B0GTW7 788 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 CAPN8A6NHC0 703 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 SH3BP5O60239 455 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 CER1O95813 267 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 LDHAP00338 332 aaKnown RBP6.91□□□□□ -1.3
ITGB1-201ENST00000302278 CISD3P0C7P0 127 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 NDUFV2P19404 249 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 PDE4CQ08493 712 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 C19orf57Q0VDD7 668 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 PTPRNQ16849 979 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 RILPL1Q5EBL4 403 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 WDR45BQ5MNZ6 344 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 L1TD1Q5T7N2 865 aaKnown RBP6.91□□□□□ -1.3
ITGB1-201ENST00000302278 DENND5BQ6ZUT9 1274 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 HTR3DQ70Z44 454 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 ADGRF2Q8IZF7 708 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 MYCBPAPQ8TBZ2 947 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 CACTINQ8WUQ7 758 aaKnown RBP6.91□□□□□ -1.3
ITGB1-201ENST00000302278 RLN3Q8WXF3 142 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 MAGEC2Q9UBF1 373 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-201ENST00000302278 RAXQ9Y2V3 346 aa6.91□□□□□ -1.3
ITGB1-201ENST00000302278 SHROOM3Q8TF72 1996 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 NPHP3-ACAD11A0A0J9YXS1 232 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 EIF5BO60841 1220 aaKnown RBP6.9□□□□□ -1.3
ITGB1-201ENST00000302278 HUS1O60921 280 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 TIE1P35590 1138 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 ALCAMQ13740 583 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 RAD54LQ92698 747 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 MYLPFQ96A32 169 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 TRPC7Q9HCX4 862 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 ITM2CQ9NQX7 267 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 ARHGEF4Q9NR80 690 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 OLFML3Q9NRN5 406 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 WSB2Q9NYS7 404 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-201ENST00000302278 SLC27A6Q9Y2P4 619 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 NME7Q9Y5B8 376 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 CPQQ9Y646 472 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 LOC400499M0QZD8 3231 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 MAP3K13O43283 966 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 PCDHGA12O60330 932 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 SYCP2LQ5T4T6 812 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 SDHAF4Q5VUM1 108 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 C19orf48Q6RUI8 117 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 PIAS4Q8N2W9 510 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-201ENST00000302278 PDCD7Q8N8D1 485 aaKnown RBP6.9□□□□□ -1.3
ITGB1-201ENST00000302278 STKLD1Q8NE28 680 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 CAMK1GQ96NX5 476 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 MAGED2Q9UNF1 606 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-201ENST00000302278 PCDHGA1Q9Y5H4 931 aa6.9□□□□□ -1.3
ITGB1-201ENST00000302278 CNOT1A5YKK6 2376 aaKnown RBP6.9□□□□□ -1.3
ITGB1-201ENST00000302278 TULP3O75386 442 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 RTN3O95197 1032 aaPredicted RBP6.9□□□□□ -1.31
ITGB1-201ENST00000302278 CFIP05156 583 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 GNSP15586 552 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 ACO1P21399 889 aaKnown RBP6.9□□□□□ -1.31
ITGB1-201ENST00000302278 OXTRP30559 389 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 POLR2BP30876 1174 aaKnown RBP6.9□□□□□ -1.31
ITGB1-201ENST00000302278 ACOT2P49753 483 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 RBP5P82980 135 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 KLHDC10Q6PID8 442 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 ZNF513Q8N8E2 541 aaPredicted RBP6.9□□□□□ -1.31
ITGB1-201ENST00000302278 TRIML1Q8N9V2 468 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 SNIP1Q8TAD8 396 aaKnown RBP6.9□□□□□ -1.31
ITGB1-201ENST00000302278 TMEM174Q8WUU8 243 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 HMGB4Q8WW32 186 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 MRGPRX1Q96LB2 322 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 SYT15Q9BQS2 421 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 VRTNQ9H8Y1 702 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 FSCN3Q9NQT6 498 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 SPHK2Q9NRA0 654 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 GTF3C4Q9UKN8 822 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 LIMCH1Q9UPQ0 1083 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 SSUH2Q9Y2M2 353 aa6.9□□□□□ -1.31
ITGB1-201ENST00000302278 LZTS3O60299 673 aaPredicted RBP6.89□□□□□ -1.31
ITGB1-201ENST00000302278 ITGB3P05106 788 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 HOXB2P14652 356 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 CD6P30203 668 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 MATR3P43243 847 aaKnown RBP eCLIP6.89□□□□□ -1.317e-7■■■■□ 20.7
ITGB1-201ENST00000302278 RTP5Q14D33 572 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 E2F5Q15329 346 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 Q6ZNB5 142 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 NUDT18Q6ZVK8 323 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 IPO4Q8TEX9 1081 aaKnown RBP6.89□□□□□ -1.31
ITGB1-201ENST00000302278 ZSCAN31Q96LW9 406 aaPredicted RBP6.89□□□□□ -1.31
ITGB1-201ENST00000302278 RAI2Q9Y5P3 530 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 C1SP09871 688 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 ATXN3P54252 364 aaPredicted RBP6.89□□□□□ -1.31
ITGB1-201ENST00000302278 IRX6P78412 446 aaPredicted RBP6.89□□□□□ -1.31
ITGB1-201ENST00000302278 LY6G5CQ5SRR4 150 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 EMC10Q5UCC4 262 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 ADALQ6DHV7 355 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 GPBP1Q86WP2 473 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 TMPRSS12Q86WS5 348 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 MIB1Q86YT6 1006 aa6.89□□□□□ -1.31
ITGB1-201ENST00000302278 RFFLQ8WZ73 363 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms