RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 USP33Q8TEY7 942 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 NSL1Q96IY1 281 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 SLITRK1Q96PX8 696 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 RRAGCQ9HB90 399 aa14.62□□□□□ -0.07
SDC2-201ENST00000302190 hCG_2014768A0A024R1R8 64 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 UNC5CO95185 931 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 MUTP22033 750 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 RPS12P25398 132 aaKnown RBP14.61□□□□□ -0.07
SDC2-201ENST00000302190 EPHX2P34913 555 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 ANKRD22Q5VYY1 191 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 TLDC1Q6P9B6 456 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 COPS5Q92905 334 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 PPWD1Q96BP3 646 aaKnown RBP14.61□□□□□ -0.07
SDC2-201ENST00000302190 NDE1Q9NXR1 346 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 CETPP11597 493 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 RPL22P35268 128 aaKnown RBP14.61□□□□□ -0.07
SDC2-201ENST00000302190 EFNA5P52803 228 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 RPL10AP62906 217 aaKnown RBP14.61□□□□□ -0.07
SDC2-201ENST00000302190 MMEL1Q495T6 779 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 DENND5BQ6ZUT9 1274 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 MAGEC3Q8TD91 643 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 ZNF516Q92618 1163 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 DDX27Q96GQ7 796 aaKnown RBP14.61□□□□□ -0.07
SDC2-201ENST00000302190 BORCS6Q96GS4 357 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 C17orf75Q9HAS0 396 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 APOBEC3GQ9HC16 384 aaKnown RBP14.61□□□□□ -0.07
SDC2-201ENST00000302190 ACSS2Q9NR19 701 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 NR2E3Q9Y5X4 410 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 MYH11P35749 1972 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 ZNF646O15015 1829 aaPredicted RBP14.61□□□□□ -0.07
SDC2-201ENST00000302190 USP12O75317 370 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 SNRPAP09012 282 aaKnown RBP14.61□□□□□ -0.07
SDC2-201ENST00000302190 GNAT1P11488 350 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 NAMPTP43490 491 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 SNX16P57768 344 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 KPNB1Q14974 876 aaKnown RBP14.61□□□□□ -0.07
SDC2-201ENST00000302190 SURF1Q15526 300 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 OTOAQ7RTW8 1153 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 GSDMBQ8TAX9 411 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 PGAP2Q9UHJ9 254 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 PLIN4Q96Q06 1357 aa14.61□□□□□ -0.07
SDC2-201ENST00000302190 KCNA4P22459 653 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 RAB27AP51159 221 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 WDR4P57081 412 aaKnown RBP14.6□□□□□ -0.07
SDC2-201ENST00000302190 POU5F1BQ06416 359 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 RASA2Q15283 850 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 SH2D4BQ5SQS7 431 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 POLNQ7Z5Q5 900 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 FAM83AQ86UY5 434 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 TRABD2AQ86V40 505 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 SIX6OS1Q8N1H7 587 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 SGF29Q96ES7 293 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 DDX50Q9BQ39 737 aaKnown RBP14.6□□□□□ -0.07
SDC2-201ENST00000302190 TLK1Q9UKI8 766 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 GOLGA8TH3BQL2 631 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 AIM2O14862 343 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 C1QBPQ07021 282 aaKnown RBP14.6□□□□□ -0.07
SDC2-201ENST00000302190 LAMTOR4Q0VGL1 99 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 NFIL3Q16649 462 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 RNF148Q8N7C7 305 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 C12orf29Q8N999 325 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 LMO3Q8TAP4 145 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 AVENQ9NQS1 362 aaPredicted RBP14.6□□□□□ -0.07
SDC2-201ENST00000302190 GOLGA8QA0A0J9YX86 632 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 GOLGA8OA6NCC3 632 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 GOLGA8NF8WBI6 632 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 RBL1P28749 1068 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 GOLGA7BQ2TAP0 167 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 PPP1R2P3Q6NXS1 205 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 C6orf89Q6UWU4 347 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 RASSF3Q86WH2 238 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 TRIM42Q8IWZ5 723 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 FAM172AQ8WUF8 416 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 VPS33BQ9H267 617 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 UBP1Q9NZI7 540 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 IL1RAPL1Q9NZN1 696 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 GGA2Q9UJY4 613 aa14.6□□□□□ -0.07
SDC2-201ENST00000302190 ATRNL1Q5VV63 1379 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 A0A087WZ62 844 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 GPD1P21695 349 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 SERPINB4P48594 390 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 DCAF6Q58WW2 860 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 KATNAL2Q8IYT4 538 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 RFWD2Q8NHY2 731 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 FIZ1Q96SL8 496 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 FDXACB1Q9BRP7 624 aaPredicted RBP14.59□□□□□ -0.07
SDC2-201ENST00000302190 ZCWPW1Q9H0M4 648 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 PCDH9Q9HC56 1237 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 NMRK2Q9NPI5 230 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 XPNPEP1Q9NQW7 623 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 LTBP3Q9NS15 1303 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 FCHO1O14526 889 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 NCKAP1LP55160 1127 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 TMEM132DQ14C87 1099 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 EEF1DP3Q658K8 133 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 CLEC4DQ8WXI8 215 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 WWP1Q9H0M0 922 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 RSAD1Q9HA92 442 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 ZC3H11AO75152 810 aaKnown RBP eCLIP14.59□□□□□ -0.074e-7■□□□□ 11.2
SDC2-201ENST00000302190 GPC4O75487 556 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms