RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 RIMBP2O15034 1052 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 SNNO75324 88 aaPredicted RBP11.33□□□□□ -0.6
ZNF558-201ENST00000301475 TOP3BO95985 862 aaKnown RBP11.33□□□□□ -0.6
ZNF558-201ENST00000301475 PTPN7P35236 360 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 XIAPP98170 497 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 TUBB3Q13509 450 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 TBCCQ15814 346 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 UGCGQ16739 394 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 GRAMD1BQ3KR37 738 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 SH2D4BQ5SQS7 431 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 POTEAQ6S8J7 498 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 TMEM270Q6UE05 265 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 DENND5BQ6ZUT9 1274 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 MIPOL1Q8TD10 442 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 VCPIP1Q96JH7 1222 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 CYP4F11Q9HBI6 524 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 PARVAQ9NVD7 372 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 C3orf70A6NLC5 250 aaPredicted RBP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 CXorf49A8MYA2 514 aaPredicted RBP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 POLRMTO00411 1230 aaKnown RBP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 NDC80O14777 642 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 VIL1P09327 827 aaKnown RBP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 POLR2MP0CAP2 368 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 ITGB5P18084 799 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 RPL5P46777 297 aaKnown RBP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 GALK1P51570 392 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 YWHAGP61981 247 aaKnown RBP eCLIP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 SNRPFP62306 86 aaKnown RBP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 BASP1P80723 227 aaKnown RBP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 BMPR2Q13873 1038 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 SMTNL2Q2TAL5 461 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 PLA2G4FQ68DD2 849 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 PGM2L1Q6PCE3 622 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 C15orf39Q6ZRI6 1047 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 SH3BP5LQ7L8J4 393 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 GAB3Q8WWW8 586 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 ZNF778Q96MU6 729 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 PHF12Q96QT6 1004 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 SLC13A1Q9BZW2 595 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 GRIP2Q9C0E4 1043 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 CDH22Q9UJ99 828 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 BRWD3Q6RI45 1802 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 CCDC160A6NGH7 325 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 CASQ2O14958 399 aaPredicted RBP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 MAGEB3O15480 346 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 AVILO75366 819 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 CLPTM1O96005 669 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 P4HBP07237 508 aaKnown RBP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 PMLP29590 882 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 SERPINB6P35237 376 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 FDFT1P37268 417 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 BTKQ06187 659 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 PEX6Q13608 980 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 MYLK3Q32MK0 819 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 TCHHL1Q5QJ38 904 aaPredicted RBP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 RABGAP1LQ5R372 815 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 FAM102BQ5T8I3 360 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 MAP3K21Q5TCX8 1036 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 LRRC38Q5VT99 294 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 ATG16L1Q676U5 607 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 KLC3Q6P597 504 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 C1orf228Q6PIY5 440 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 CRLF3Q8IUI8 442 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 ZFP28Q8NHY6 868 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 APOBEC3GQ9HC16 384 aaKnown RBP11.32□□□□□ -0.6
ZNF558-201ENST00000301475 INPP5FQ9Y2H2 1132 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 TEX264Q9Y6I9 313 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 PTPRJQ12913 1337 aa11.32□□□□□ -0.6
ZNF558-201ENST00000301475 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-201ENST00000301475 UGT1A9O60656 530 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 HLA-DRAP01903 254 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 PROCP04070 461 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 WEE2P0C1S8 567 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 NPTX2P47972 431 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 SOX10P56693 466 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 GK3PQ14409 553 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 TRIM72Q6ZMU5 477 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 HPS6Q86YV9 775 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 NUDCD3Q8IVD9 361 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 PPM1NQ8N819 430 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 BSNDQ8WZ55 320 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 ABTB1Q969K4 478 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-201ENST00000301475 CATSPER2Q96P56 530 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 BTBD9Q96Q07 612 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 SENP6Q9GZR1 1112 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-201ENST00000301475 UGT1A7Q9HAW7 530 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 UGT1A10Q9HAW8 530 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 UGT1A8Q9HAW9 530 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 PICK1Q9NRD5 415 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 POMPQ9Y244 141 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 TTLL3Q9Y4R7 772 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 TCRBV5S1A1TA0A578 114 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 BTBD19C9JJ37 291 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 CST8O60676 142 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 ZC3H11AO75152 810 aaKnown RBP eCLIP11.31□□□□□ -0.6
ZNF558-201ENST00000301475 RFPL1O75677 317 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 ATP6V1B1P15313 513 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 MMP8P22894 467 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 YWHABP31946 246 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms