RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ITGADQ13349 1161 aa15□□□□□ -0.01
CDT1-201ENST00000301019 ABCB5Q2M3G0 1257 aa15□□□□□ -0.01
CDT1-201ENST00000301019 THOC7Q6I9Y2 204 aaKnown RBP15□□□□□ -0.01
CDT1-201ENST00000301019 MYO1HQ8N1T3 1032 aa15□□□□□ -0.01
CDT1-201ENST00000301019 ZFYVE28Q9HCC9 887 aa15□□□□□ -0.01
CDT1-201ENST00000301019 RABGEF1Q9UJ41 708 aa15□□□□□ -0.01
CDT1-201ENST00000301019 CEPT1Q9Y6K0 416 aa15□□□□□ -0.01
CDT1-201ENST00000301019 GOLGA8QA0A0J9YX86 632 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 GOLGA8OA6NCC3 632 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 GOLGA8NF8WBI6 632 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 ATP2A1O14983 1001 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 P4HA1P13674 534 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 GDF10P55107 478 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 PEX3P56589 373 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 BNIP3Q12983 259 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 MROH9Q5TGP6 573 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 TXNRD3NBQ6F5E7 133 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 CHST15Q7LFX5 561 aaPredicted RBP14.99□□□□□ -0.01
CDT1-201ENST00000301019 IGDCC3Q8IVU1 814 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 CCDC33Q8N5R6 958 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 BANPQ8N9N5 519 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 LZICQ8WZA0 190 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 CELF1Q92879 486 aaKnown RBP14.99□□□□□ -0.01
CDT1-201ENST00000301019 SETDB2Q96T68 719 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 GPATCH1Q9BRR8 931 aaKnown RBP14.99□□□□□ -0.01
CDT1-201ENST00000301019 SIAEQ9HAT2 523 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 CDH22Q9UJ99 828 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 DUOX1Q9NRD9 1551 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 SCN7AQ01118 1682 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 RPS6P62753 249 aaKnown RBP14.99□□□□□ -0.01
CDT1-201ENST00000301019 BFSP1Q12934 665 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 KCNT1Q5JUK3 1230 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 PLEKHA7Q6IQ23 1121 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 ELMSAN1Q6PJG2 1045 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 PHTF2Q8N3S3 785 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 TTC13Q8NBP0 860 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 ACTRT2Q8TDY3 377 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 NYXQ9GZU5 481 aa14.99□□□□□ -0.01
CDT1-201ENST00000301019 AGRPO00253 132 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 FAM58BPP0C7Q3 252 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 ZNF76P36508 570 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 SERPINB5P36952 375 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 GRM2Q14416 872 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 ERFEQ4G0M1 354 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 DNAL1Q4LDG9 190 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 EGFLAMQ63HQ2 1017 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 WDR75Q8IWA0 830 aaKnown RBP14.98□□□□□ -0.01
CDT1-201ENST00000301019 E2F7Q96AV8 911 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 RBM38Q9H0Z9 239 aaKnown RBP14.98□□□□□ -0.01
CDT1-201ENST00000301019 PCDH12Q9NPG4 1184 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 TIMMDC1Q9NPL8 285 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 WDR70Q9NW82 654 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 GTF3C4Q9UKN8 822 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 RABGAP1Q9Y3P9 1069 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 CAPN14A8MX76 684 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 EML1O00423 815 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 NEMP1O14524 444 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 TCEA3O75764 348 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 PTPN1P18031 435 aaKnown RBP14.98□□□□□ -0.01
CDT1-201ENST00000301019 TCEA1P23193 301 aaKnown RBP14.98□□□□□ -0.01
CDT1-201ENST00000301019 EIF3EP60228 445 aaKnown RBP14.98□□□□□ -0.01
CDT1-201ENST00000301019 ITGA9Q13797 1035 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 SEPT6Q14141 434 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 CLUL1Q15846 466 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 TSPAN14Q8NG11 270 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 AGPAT3Q9NRZ7 376 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 ITM2AO43736 263 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 S100BP04271 92 aaPredicted RBP14.98□□□□□ -0.01
CDT1-201ENST00000301019 FGRP09769 529 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 FAM86B2P0C5J1 330 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 STIP1P31948 543 aaKnown RBP14.98□□□□□ -0.01
CDT1-201ENST00000301019 CDK8P49336 464 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 SH3BGRP55822 239 aaPredicted RBP14.98□□□□□ -0.01
CDT1-201ENST00000301019 RPL10AP62906 217 aaKnown RBP14.98□□□□□ -0.01
CDT1-201ENST00000301019 KRT72Q14CN4 511 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 FRMD7Q6ZUT3 714 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 BBS5Q8N3I7 341 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 TRIM11Q96F44 468 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 KREMEN1Q96MU8 473 aa14.98□□□□□ -0.01
CDT1-201ENST00000301019 CASZ1Q86V15 1759 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 A0A1W2PPW3 197 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 CLIC3O95833 236 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 CD247P20963 164 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 NDST2P52849 883 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 COPAP53621 1224 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 SNAPC2Q13487 334 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 KRT80Q6KB66 452 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 MFSD7Q6UXD7 560 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 TRIM72Q6ZMU5 477 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 CRLF3Q8IUI8 442 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 ADGRF4Q8IZF3 695 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 CENPSQ8N2Z9 138 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 MARK4Q96L34 752 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 PIH1D1Q9NWS0 290 aaKnown RBP14.97□□□□□ -0.01
CDT1-201ENST00000301019 DNAJC16Q9Y2G8 782 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 DNALI1O14645 258 aaPredicted RBP14.97□□□□□ -0.01
CDT1-201ENST00000301019 GIPC1O14908 333 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 TNFAIP8O95379 198 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 SPATA31C1P0DKV0 1188 aa14.97□□□□□ -0.01
CDT1-201ENST00000301019 CYP11B1P15538 503 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms