RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 KITP10721 976 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 CLCNKBP51801 687 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 PDK1Q15118 436 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 FAM182AQ5T1J6 154 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 CCDC62Q6P9F0 684 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 GPATCH11Q8N954 259 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 DMAP1Q9NPF5 467 aaPredicted RBP10.59□□□□□ -0.71
GABRB3-201ENST00000299267 AJAP1Q9UKB5 411 aaPredicted RBP10.59□□□□□ -0.71
GABRB3-201ENST00000299267 DSEQ9UL01 958 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 RARAP10276 462 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 NOVP48745 357 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 MAMLD1Q13495 774 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 CNGA2Q16280 664 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 C9orf57Q5W0N0 161 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 SMARCD1Q96GM5 515 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 VPS39Q96JC1 886 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 PCYT2Q99447 389 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 PTPN18Q99952 460 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 ELAC2Q9BQ52 826 aaKnown RBP10.59□□□□□ -0.71
GABRB3-201ENST00000299267 NTPCRQ9BSD7 190 aaKnown RBP10.59□□□□□ -0.71
GABRB3-201ENST00000299267 CERS4Q9HA82 394 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 APOBEC3GQ9HC16 384 aaKnown RBP10.59□□□□□ -0.71
GABRB3-201ENST00000299267 FRMD3A2A2Y4 597 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 H7C4K7 107 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 RPLP2P05387 115 aaKnown RBP10.58□□□□□ -0.72
GABRB3-201ENST00000299267 PAEPP09466 180 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 ZSCAN5DPP0CG00 497 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 TYK2P29597 1187 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 HOXD13P35453 343 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 CDH18Q13634 790 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 GDF6Q6KF10 455 aaPredicted RBP10.58□□□□□ -0.72
GABRB3-201ENST00000299267 RBM23Q86U06 439 aaKnown RBP10.58□□□□□ -0.72
GABRB3-201ENST00000299267 YAF2Q8IY57 180 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 CCNYL1Q8N7R7 359 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 DDI1Q8WTU0 396 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 ATXN3LQ9H3M9 355 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 CHST7Q9NS84 486 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 CCDC85CA6NKD9 419 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 GPC4O75487 556 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 KRT38O76015 456 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 ITIH2P19823 946 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 RPL10AP62906 217 aaKnown RBP10.58□□□□□ -0.72
GABRB3-201ENST00000299267 TMPRSS15P98073 1019 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 ZNF268Q14587 947 aaPredicted RBP10.58□□□□□ -0.72
GABRB3-201ENST00000299267 ANO4Q32M45 955 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 FAM183BPQ6ZVS7 135 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.58□□□□□ -0.72
GABRB3-201ENST00000299267 ANGPTL3Q9Y5C1 460 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 PRR23AA6NEV1 266 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 MAGEA4P43358 317 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 NOMO3P69849 1222 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 SLC6A3Q01959 620 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 GUCY1A3Q02108 690 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 CAV1Q03135 178 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 TLE2Q04725 743 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 COBLL1Q53SF7 1204 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 TRIB2Q92519 343 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 PPP2R3CQ969Q6 453 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 AFF4Q9UHB7 1163 aaKnown RBP10.58□□□□□ -0.72
GABRB3-201ENST00000299267 A0A087WUV0 522 aaPredicted RBP10.58□□□□□ -0.72
GABRB3-201ENST00000299267 PSTPIP1O43586 416 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 LTFP02788 710 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 CYP2F1P24903 491 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 OR1D2P34982 312 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 MMRN1Q13201 1228 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 CST9Q5W186 159 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 HGSNATQ68CP4 663 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 NT5DC4Q86YG4 428 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 C12orf56Q8IXR9 622 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 JOSD2Q8TAC2 188 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 TFB1MQ8WVM0 346 aaKnown RBP10.58□□□□□ -0.72
GABRB3-201ENST00000299267 ZNF516Q92618 1163 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 B3GALT6Q96L58 329 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 CATSPERBQ9H7T0 1116 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 DMAC2Q9NW81 257 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 RNF186Q9NXI6 227 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 SALL4Q9UJQ4 1053 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 DCTN4Q9UJW0 460 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 VANGL2Q9ULK5 521 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 MYH1P12882 1939 aa10.58□□□□□ -0.72
GABRB3-201ENST00000299267 TARSL2A2RTX5 802 aaKnown RBP10.57□□□□□ -0.72
GABRB3-201ENST00000299267 A6NNZ2 444 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 B4GALT4O60513 344 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 YWHAQP27348 245 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 ELAVL2Q12926 359 aaKnown RBP10.57□□□□□ -0.72
GABRB3-201ENST00000299267 PLD1Q13393 1074 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 TUBB8Q3ZCM7 444 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 ZC3H12AQ5D1E8 599 aaKnown RBP10.57□□□□□ -0.72
GABRB3-201ENST00000299267 ZNF618Q5T7W0 954 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 TADA2BQ86TJ2 420 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 CACUL1Q86Y37 369 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 CARNMT1Q8N4J0 409 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 MMGT1Q8N4V1 131 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 C3orf20Q8ND61 904 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 DNPEPQ9ULA0 475 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 PTCH2Q9Y6C5 1203 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 HMGB1P1B2RPK0 211 aaPredicted RBP10.57□□□□□ -0.72
GABRB3-201ENST00000299267 CBX4O00257 560 aa10.57□□□□□ -0.72
GABRB3-201ENST00000299267 TRDMT1O14717 391 aaKnown RBP10.57□□□□□ -0.72
GABRB3-201ENST00000299267 NPR3P17342 541 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms