RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 SNCAIPQ9Y6H5 919 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 C15orf38-AP3S2A0A0A6YYH1 394 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 KCNN4O15554 427 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 MSX2P35548 267 aaPredicted RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 CDH6P55285 790 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 HHIPL2Q6UWX4 724 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 ARPINQ7Z6K5 226 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 ZBTB33Q86T24 672 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 HPS6Q86YV9 775 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 TRIML2Q8N7C3 387 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 RNF148Q8N7C7 305 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 DEPTORQ8TB45 409 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 DNAAF2Q9NVR5 837 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 COQ4Q9Y3A0 265 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 SORBS2O94875 1100 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 TMCC1O94876 653 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 TOP3BO95985 862 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 ZBED1O96006 694 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 SPATA31D3P0C874 917 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 MAPTP10636 758 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 POLR2BP30876 1174 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 CDKN2BP42772 138 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 NLRP11P59045 1033 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 CYLC2Q14093 348 aaPredicted RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 DPYSL3Q14195 570 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 OASLQ15646 514 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 NPNTQ6UXI9 565 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 SPATA31D4Q6ZUB0 917 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 C15orf52Q6ZUT6 534 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 MAP4K3Q8IVH8 894 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 SHKBP1Q8TBC3 707 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 ANLNQ9NQW6 1124 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 A0A0B4J269 797 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 TMEM191CA6NGB0 347 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 NFIBO00712 420 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 ITGA2BP08514 1039 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 CD48P09326 243 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 TMEM191BP0C7N4 346 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 CRABP2P29373 138 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 GALK1P51570 392 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 TFAMQ00059 246 aaKnown RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 TKFCQ3LXA3 575 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 TDRD10Q5VZ19 366 aaKnown RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 NXNQ6DKJ4 435 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 CHSY1Q86X52 802 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 MYLK4Q86YV6 388 aaPredicted RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 RNF168Q8IYW5 571 aaPredicted RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 GMCL1P1Q8NEA9 526 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 SLC44A1Q8WWI5 657 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 NKD2Q969F2 451 aaPredicted RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 NGLY1Q96IV0 654 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 ZBTB45Q96K62 511 aaPredicted RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 MRPL1Q9BYD6 325 aaKnown RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 TMCO1Q9UM00 188 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 INPP5FQ9Y2H2 1132 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 K7ERI5 159 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 DGKIO75912 1065 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 RFC1P35251 1148 aaPredicted RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 RGS2P41220 211 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 OSTNP61366 133 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 TBL3Q12788 808 aaKnown RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 ORC1Q13415 861 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 LSAMPQ13449 338 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 ACAP1Q15027 740 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 SWSAP1Q6NVH7 229 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 FAM172AQ8WUF8 416 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 ATXN7L3BQ96GX2 97 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 STRA6Q9BX79 667 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 MYH9P35579 1960 aaKnown RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 DCXO43602 365 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 UGT1A9O60656 530 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 KLHL2O95198 593 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 TCN1P20061 433 aaPredicted RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 OSBPP22059 807 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 NCKAP1LP55160 1127 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 FASTKD1Q53R41 847 aaKnown RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 ARHGEF16Q5VV41 709 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 LARGE2Q8N3Y3 721 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 BSNDQ8WZ55 320 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 ZNF516Q92618 1163 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 DGCR14Q96DF8 476 aaKnown RBP11.85□□□□□ -0.51
TRUB1-201ENST00000298746 VCPIP1Q96JH7 1222 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 UGT1A7Q9HAW7 530 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 UGT1A10Q9HAW8 530 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 UGT1A8Q9HAW9 530 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 FAM198AQ9UFP1 575 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 ZNRF3Q9ULT6 936 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 PLLPQ9Y342 182 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 NUB1Q9Y5A7 615 aa11.85□□□□□ -0.51
TRUB1-201ENST00000298746 SMIM31A0A1B0GVY4 71 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 E9PBE3 544 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 XPO1O14980 1071 aaKnown RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 ZNF862O60290 1169 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 KLHL41O60662 606 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 ZC3H11AO75152 810 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 TBXAS1P24557 533 aaPredicted RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 ADARP55265 1226 aaKnown RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 SNRPFP62306 86 aaKnown RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 JAG1P78504 1218 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms