RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 JADE1Q6IE81 842 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 ALYREFQ86V81 257 aaKnown RBP25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 C12orf42Q96LP6 360 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 CDT1Q9H211 546 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 C19orf81C9J6K1 198 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 NOP56O00567 594 aaKnown RBP25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 RXFP2Q8WXD0 754 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 SPDL1Q96EA4 605 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 TRIM49D1C9J1S8 452 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 HAUS5O94927 633 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 ZBTB7AO95365 584 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 PDGFRAP16234 1089 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 PTDSS1P48651 473 aaKnown RBP25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 IRX4P78413 519 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 IER5Q5VY09 327 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 NETO2Q8NC67 525 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 CMASQ8NFW8 434 aaPredicted RBP25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 DTX3LQ8TDB6 740 aa25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 RPF1Q9H9Y2 349 aaKnown RBP25.44■■□□□ 1.66
SPTSSA-201ENST00000298130 MYL2P10916 166 aa25.43■■□□□ 1.66
SPTSSA-201ENST00000298130 SLC8A3P57103 927 aa25.43■■□□□ 1.66
SPTSSA-201ENST00000298130 RINLQ6ZS11 566 aa25.43■■□□□ 1.66
SPTSSA-201ENST00000298130 DNERQ8NFT8 737 aa25.43■■□□□ 1.66
SPTSSA-201ENST00000298130 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.43■■□□□ 1.66
SPTSSA-201ENST00000298130 RBL1P28749 1068 aa25.43■■□□□ 1.66
SPTSSA-201ENST00000298130 DALRD3Q5D0E6 543 aaKnown RBP25.43■■□□□ 1.66
SPTSSA-201ENST00000298130 NGRNQ9NPE2 291 aaKnown RBP25.43■■□□□ 1.66
SPTSSA-201ENST00000298130 GGA3Q9NZ52 723 aa25.43■■□□□ 1.66
SPTSSA-201ENST00000298130 LCTP09848 1927 aa25.43■■□□□ 1.66
SPTSSA-201ENST00000298130 HMGCRP04035 888 aa25.42■■□□□ 1.66
SPTSSA-201ENST00000298130 APRTP07741 180 aa25.42■■□□□ 1.66
SPTSSA-201ENST00000298130 CCDC110Q8TBZ0 833 aa25.42■■□□□ 1.66
SPTSSA-201ENST00000298130 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.42■■□□□ 1.66
SPTSSA-201ENST00000298130 MED7O43513 233 aa25.42■■□□□ 1.66
SPTSSA-201ENST00000298130 CYP3A5P20815 502 aa25.42■■□□□ 1.66
SPTSSA-201ENST00000298130 CA9Q16790 459 aa25.42■■□□□ 1.66
SPTSSA-201ENST00000298130 CDCA2Q69YH5 1023 aaPredicted RBP25.42■■□□□ 1.66
SPTSSA-201ENST00000298130 TMEM176AQ96HP8 235 aa25.42■■□□□ 1.66
SPTSSA-201ENST00000298130 VPS11Q9H270 941 aa25.42■■□□□ 1.66
SPTSSA-201ENST00000298130 LHX5Q9H2C1 402 aa25.42■■□□□ 1.66
SPTSSA-201ENST00000298130 TEX264Q9Y6I9 313 aa25.42■■□□□ 1.66
SPTSSA-201ENST00000298130 TM9SF1O15321 606 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 PCK1P35558 622 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 ETV4P43268 484 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 GPD2P43304 727 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 RASSF2P50749 326 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 PPP6R3Q5H9R7 873 aaPredicted RBP25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 GJC2Q5T442 439 aaPredicted RBP25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 WDR78Q5VTH9 848 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 CES4AQ5XG92 561 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 EFCAB12Q6NXP0 572 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 METTL7BQ6UX53 244 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 CYP4V2Q6ZWL3 525 aaPredicted RBP25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 FBXO16Q8IX29 292 aaPredicted RBP25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 SLC44A1Q8WWI5 657 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 LPIN3Q9BQK8 851 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 PTPRHQ9HD43 1115 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 PIH1D1Q9NWS0 290 aaKnown RBP25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 IQANK1A0A1B0GTG1 560 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 WFS1O76024 890 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 KRT81Q14533 505 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 KPNB1Q14974 876 aaKnown RBP25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 TAZQ16635 292 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 FAM183BPQ6ZVS7 135 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 ARMC2Q8NEN0 867 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 FBXO27Q8NI29 283 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 SRPK1Q96SB4 655 aaKnown RBP25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 SMYD2Q9NRG4 433 aa25.41■■□□□ 1.66
SPTSSA-201ENST00000298130 KRT36O76013 467 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 SERPINB4P48594 390 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 RASA2Q15283 850 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 APOPT1Q96IL0 206 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 FAXDC2Q96IV6 333 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 GPR20Q99678 358 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 ACKR2O00590 384 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 GYG2O15488 501 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 STAG3L1P0CL83 205 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 RXRBP28702 533 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 PEX19P40855 299 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 NEK3P51956 506 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 C4orf50Q6ZRC1 276 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 TSHZ1Q6ZSZ6 1077 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 WDR60Q8WVS4 1066 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 ACAP3Q96P50 834 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 NMUR2Q9GZQ4 415 aa25.4■■□□□ 1.66
SPTSSA-201ENST00000298130 MGAMO43451 1857 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 B4GALT4O60513 344 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 DLDP09622 509 aaKnown RBP25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 ATXN1P54253 815 aaKnown RBP25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 YWHAZP63104 245 aaKnown RBP25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 MXD4Q14582 209 aaPredicted RBP25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 KCNJ11Q14654 390 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 NOMO1Q15155 1222 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 IQCGQ9H095 443 aaKnown RBP25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 CXCL16Q9H2A7 254 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 RSAD1Q9HA92 442 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 EFR3BQ9Y2G0 817 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 COPEO14579 308 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 CILPO75339 1184 aa25.39■■□□□ 1.66
SPTSSA-201ENST00000298130 TFE3P19532 575 aaPredicted RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms