RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 NKX1-2Q9UD57 310 aaPredicted RBP6.98□□□□□ -1.29
TMC1-201ENST00000297784 INTUQ9ULD6 942 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 STK38LQ9Y2H1 464 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 BZW2Q9Y6E2 419 aaKnown RBP6.98□□□□□ -1.29
TMC1-201ENST00000297784 SQORQ9Y6N5 450 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 A0A0U1RQF3 1178 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 PIRO00625 290 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 MAP3K13O43283 966 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 PENKP01210 267 aaPredicted RBP6.98□□□□□ -1.29
TMC1-201ENST00000297784 RPLP2P05387 115 aaKnown RBP6.98□□□□□ -1.29
TMC1-201ENST00000297784 WEE2P0C1S8 567 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 ITGA4P13612 1032 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 POLR2BP30876 1174 aaKnown RBP6.98□□□□□ -1.29
TMC1-201ENST00000297784 ATN1P54259 1190 aaPredicted RBP6.98□□□□□ -1.29
TMC1-201ENST00000297784 CDH8P55286 799 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 IFI35P80217 286 aaPredicted RBP6.98□□□□□ -1.29
TMC1-201ENST00000297784 FMO1Q01740 532 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 DHX34Q14147 1143 aaKnown RBP6.98□□□□□ -1.29
TMC1-201ENST00000297784 WDR72Q3MJ13 1102 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 SPDYAQ5MJ70 313 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 TMEM154Q6P9G4 183 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 CRIPAKQ8N1N5 446 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 RBBP8NLQ8NC74 664 aaPredicted RBP6.98□□□□□ -1.29
TMC1-201ENST00000297784 HES6Q96HZ4 224 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 CCDC28BQ9BUN5 200 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 C1orf112Q9NSG2 853 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 NOD1Q9Y239 953 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 DERAQ9Y315 318 aa6.98□□□□□ -1.29
TMC1-201ENST00000297784 ARL5CA6NH57 179 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 SPTLC1O15269 473 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 ZNF623O75123 536 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 KRT19P08727 400 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 SETSIPP0DME0 302 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 RAP1GAPP47736 663 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 GJA8P48165 433 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 RAD23BP54727 409 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 WDR44Q5JSH3 913 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 C1orf53Q5VUE5 145 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 TRIM68Q6AZZ1 485 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 ZDHHC24Q6UX98 284 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 ZNF598Q86UK7 904 aaKnown RBP6.97□□□□□ -1.29
TMC1-201ENST00000297784 NT5DC4Q86YG4 428 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 KCNV2Q8TDN2 545 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 CKAP2Q8WWK9 683 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 DNAJC9Q8WXX5 260 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 NCSTNQ92542 709 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 AZIN2Q96A70 460 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 RPS6KC1Q96S38 1066 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 AGPAT1Q99943 283 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 ADAM2Q99965 735 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.97□□□□□ -1.29
TMC1-201ENST00000297784 WNT8AQ9H1J5 351 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 DMAP1Q9NPF5 467 aaPredicted RBP6.97□□□□□ -1.29
TMC1-201ENST00000297784 HMGXB4Q9UGU5 601 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 ITGA11Q9UKX5 1188 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 SLC4A7Q9Y6M7 1214 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 ALPK3Q96L96 1907 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 PQBP1O60828 265 aaKnown RBP6.97□□□□□ -1.29
TMC1-201ENST00000297784 TNNC2P02585 160 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 HSPA1AP0DMV8 641 aaKnown RBP6.97□□□□□ -1.29
TMC1-201ENST00000297784 HSPA1BP0DMV9 641 aaKnown RBP6.97□□□□□ -1.29
TMC1-201ENST00000297784 ITGB8P26012 769 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 MLH1P40692 756 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 ZNF699Q32M78 642 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 C9orf57Q5W0N0 161 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 ENOSF1Q7L5Y1 443 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 ARHGAP18Q8N392 663 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 ANKLE1Q8NAG6 615 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 TWNKQ96RR1 684 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 NAP1L3Q99457 506 aaPredicted RBP6.97□□□□□ -1.29
TMC1-201ENST00000297784 PAAF1Q9BRP4 392 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 SMYD3Q9H7B4 428 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 ZWILCHQ9H900 591 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 RGS18Q9NS28 235 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 CISHQ9NSE2 258 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 PCMTD2Q9NV79 361 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 PARP2Q9UGN5 583 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 LRCH1Q9Y2L9 728 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 SIGLEC16A6NMB1 481 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 TCP11X1B4DZS4 312 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 TRAFD1O14545 582 aaPredicted RBP6.97□□□□□ -1.29
TMC1-201ENST00000297784 PYGBP11216 843 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 AUHQ13825 339 aaKnown RBP6.97□□□□□ -1.29
TMC1-201ENST00000297784 PABPC1LQ4VXU2 614 aaKnown RBP6.97□□□□□ -1.29
TMC1-201ENST00000297784 ALKBH5Q6P6C2 394 aaKnown RBP6.97□□□□□ -1.29
TMC1-201ENST00000297784 TMEM270Q6UE05 265 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 LRRC8DQ7L1W4 858 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 PEX26Q7Z412 305 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 NT5DC3Q86UY8 548 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 MAIP1Q8WWC4 291 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 HPDLQ96IR7 371 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 GAD1Q99259 594 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 DPH5Q9H2P9 285 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 FGFR1OP2Q9NVK5 253 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 NXF1Q9UBU9 619 aaKnown RBP6.97□□□□□ -1.29
TMC1-201ENST00000297784 SCOCQ9UIL1 159 aa6.97□□□□□ -1.29
TMC1-201ENST00000297784 TTC3P53804 2025 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 MICAL3Q7RTP6 2002 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 TSC2P49815 1807 aa6.96□□□□□ -1.29
TMC1-201ENST00000297784 FNDC1Q4ZHG4 1894 aaPredicted RBP6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms