RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 NOMO1Q15155 1222 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 GPAT2Q6NUI2 795 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 OR5B17Q8NGF7 314 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.97■□□□□ 0.795e-42■■□□□ 12
TRA2A-201ENST00000297071 FAM161BQ96MY7 647 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 GBP5Q96PP8 586 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 GMLQ99445 158 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 ECSITQ9BQ95 431 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 DHX33Q9H6R0 707 aaKnown RBP19.97■□□□□ 0.79
TRA2A-201ENST00000297071 RAVER2Q9HCJ3 691 aaKnown RBP19.97■□□□□ 0.79
TRA2A-201ENST00000297071 CHMP2BQ9UQN3 213 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 TTLL3Q9Y4R7 772 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 KBTBD13C9JR72 458 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 MED7O43513 233 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 KRT3P12035 628 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 AOC1P19801 751 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 TEX44Q53QW1 395 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 FAM47CQ5HY64 1035 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 FOXB2Q5VYV0 432 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 RSBN1LQ6PCB5 846 aaPredicted RBP19.97■□□□□ 0.79
TRA2A-201ENST00000297071 ARFGAP1Q8N6T3 406 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 SLC4A11Q8NBS3 891 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 FAM84AQ96KN4 292 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 OLFM3Q96PB7 478 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 GLIS2Q9BZE0 524 aaPredicted RBP19.97■□□□□ 0.79
TRA2A-201ENST00000297071 FAM96AQ9H5X1 160 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 NDE1Q9NXR1 346 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 PAK5Q9P286 719 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 RLFQ13129 1914 aa19.97■□□□□ 0.79
TRA2A-201ENST00000297071 TFDP2Q14188 446 aa19.96■□□□□ 0.79
TRA2A-201ENST00000297071 SLC5A9Q2M3M2 681 aa19.96■□□□□ 0.79
TRA2A-201ENST00000297071 SWSAP1Q6NVH7 229 aa19.96■□□□□ 0.79
TRA2A-201ENST00000297071 TIFABQ6ZNK6 161 aa19.96■□□□□ 0.79
TRA2A-201ENST00000297071 TTC7BQ86TV6 843 aa19.96■□□□□ 0.79
TRA2A-201ENST00000297071 KBTBD2Q8IY47 623 aa19.96■□□□□ 0.79
TRA2A-201ENST00000297071 ULK2Q8IYT8 1036 aa19.96■□□□□ 0.79
TRA2A-201ENST00000297071 RBM15BQ8NDT2 890 aaKnown RBP19.96■□□□□ 0.79
TRA2A-201ENST00000297071 FLAD1Q8NFF5 587 aa19.96■□□□□ 0.79
TRA2A-201ENST00000297071 DEPTORQ8TB45 409 aa19.96■□□□□ 0.79
TRA2A-201ENST00000297071 KLF6Q99612 283 aaPredicted RBP19.96■□□□□ 0.79
TRA2A-201ENST00000297071 VCX3BQ9H321 246 aa19.96■□□□□ 0.79
TRA2A-201ENST00000297071 JPH1Q9HDC5 661 aaPredicted RBP19.96■□□□□ 0.79
TRA2A-201ENST00000297071 CISHQ9NSE2 258 aa19.96■□□□□ 0.79
TRA2A-201ENST00000297071 FAM237BA0A1B0GVD1 139 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 MAP3K13O43283 966 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 NR3C2P08235 984 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 RBP3P10745 1247 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 AMPD1P23109 780 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 BRD2P25440 801 aaKnown RBP19.95■□□□□ 0.78
TRA2A-201ENST00000297071 IL1R2P27930 398 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 RFC1P35251 1148 aaPredicted RBP19.95■□□□□ 0.78
TRA2A-201ENST00000297071 SERPINB9P50453 376 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 ROR1Q01973 937 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 BST1Q10588 318 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 BIRC2Q13490 618 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 R3HDM1Q15032 1099 aaKnown RBP19.95■□□□□ 0.78
TRA2A-201ENST00000297071 HSF5Q4G112 596 aaPredicted RBP19.95■□□□□ 0.78
TRA2A-201ENST00000297071 RIPOR1Q6ZS17 1223 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 CYS1Q717R9 158 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 TREML1Q86YW5 311 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 CRLF3Q8IUI8 442 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 IGDCC3Q8IVU1 814 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 MCUQ8NE86 351 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 PIP4K2CQ8TBX8 421 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 PANX3Q96QZ0 392 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 ZNF341Q9BYN7 854 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 C12orf65Q9H3J6 166 aaKnown RBP19.95■□□□□ 0.78
TRA2A-201ENST00000297071 PIDD1Q9HB75 910 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 VCX3AQ9NNX9 186 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 EIF4E1BA6NMX2 242 aaKnown RBP19.95■□□□□ 0.78
TRA2A-201ENST00000297071 YDJCA8MPS7 323 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 TRIM49D1C9J1S8 452 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 SUPT20HL2P0C7V6 817 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 CNTFP26441 200 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 CRHR1P34998 444 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 PSMC4P43686 418 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 RPS6KA3P51812 740 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 BASP1P80723 227 aaKnown RBP19.95■□□□□ 0.78
TRA2A-201ENST00000297071 SUPT20HL1Q3ZLR7 823 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 ACAD11Q709F0 780 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 RFX6Q8HWS3 928 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 CPXCR1Q8N123 301 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 DTX3LQ8TDB6 740 aa19.95■□□□□ 0.78
TRA2A-201ENST00000297071 NIFKQ9BYG3 293 aaKnown RBP19.95■□□□□ 0.78
TRA2A-201ENST00000297071 H0YIN7 160 aa19.94■□□□□ 0.78
TRA2A-201ENST00000297071 H3BRJ5 948 aa19.94■□□□□ 0.78
TRA2A-201ENST00000297071 KRT38O76015 456 aa19.94■□□□□ 0.78
TRA2A-201ENST00000297071 MYL4P12829 197 aa19.94■□□□□ 0.78
TRA2A-201ENST00000297071 SSTR3P32745 418 aaPredicted RBP19.94■□□□□ 0.78
TRA2A-201ENST00000297071 ACTR2P61160 394 aa19.94■□□□□ 0.78
TRA2A-201ENST00000297071 CUL3Q13618 768 aa19.94■□□□□ 0.78
TRA2A-201ENST00000297071 ALYREFQ86V81 257 aaKnown RBP19.94■□□□□ 0.78
TRA2A-201ENST00000297071 CCDC60Q8IWA6 550 aaPredicted RBP19.94■□□□□ 0.78
TRA2A-201ENST00000297071 PHC3Q8NDX5 983 aa19.94■□□□□ 0.78
TRA2A-201ENST00000297071 JADE3Q92613 823 aa19.94■□□□□ 0.78
TRA2A-201ENST00000297071 CENPKQ9BS16 269 aa19.94■□□□□ 0.78
TRA2A-201ENST00000297071 ADAM33Q9BZ11 813 aa19.94■□□□□ 0.78
TRA2A-201ENST00000297071 PPARGC1AQ9UBK2 798 aaKnown RBP19.94■□□□□ 0.78
TRA2A-201ENST00000297071 SOX13Q9UN79 622 aa19.94■□□□□ 0.78
TRA2A-201ENST00000297071 WASF2Q9Y6W5 498 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms