RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 TEX13BQ9BXU2 312 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 SMARCAD1Q9H4L7 1026 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 VTI1BQ9UEU0 232 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 EIF3LQ9Y262 564 aaKnown RBP11.39□□□□□ -0.59
PBRM1-201ENST00000296302 FAM205AQ6ZU69 1335 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 RNF103O00237 685 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 DDX3XO00571 662 aaKnown RBP eCLIP11.39□□□□□ -0.59
PBRM1-201ENST00000296302 RBP1P09455 135 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 DRD4P21917 467 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 GSTT1P30711 240 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 SLC1A6P48664 564 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 PKN2Q16513 984 aaKnown RBP11.39□□□□□ -0.59
PBRM1-201ENST00000296302 GSTA3Q16772 222 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 CCDC153Q494R4 210 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 ARMCX4Q5H9R4 360 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 TBCELQ5QJ74 424 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 SLC47A2Q86VL8 602 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 OR6Y1Q8NGX8 325 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 SLC7A14Q8TBB6 771 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 CBWD1Q9BRT8 395 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.39□□□□□ -0.59
PBRM1-201ENST00000296302 DAPK2Q9UIK4 370 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 ACOT9Q9Y305 439 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 A0A087WXM4 84 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 RHOBTB1O94844 696 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 RARBP10826 455 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 NNMTP40261 264 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 C21orf59P57076 290 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 NFYCQ13952 458 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 PCSK7Q16549 785 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 RSPH1Q8WYR4 309 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 PHF21AQ96BD5 680 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 HPDLQ96IR7 371 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 SRPK1Q96SB4 655 aaKnown RBP11.39□□□□□ -0.59
PBRM1-201ENST00000296302 COMMD3-BMI1R4GMX3 469 aa11.39□□□□□ -0.59
PBRM1-201ENST00000296302 SPDYE5A6NIY4 337 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 LIN7AO14910 233 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 CAMTA2O94983 1202 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 PECAM1P16284 738 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 ME2P23368 584 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 SREBF1P36956 1147 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 CCDC142Q17RM4 750 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 SPDYE7PQ495Y7 208 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 KCNT1Q5JUK3 1230 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 PRMT9Q6P2P2 845 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 MCOLN2Q8IZK6 566 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 ZCCHC7Q8N3Z6 543 aaKnown RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 ZCCHC9Q8N567 271 aaKnown RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 URGCPQ8TCY9 931 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 OSCP1Q8WVF1 389 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 VCPIP1Q96JH7 1222 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 CNGB3Q9NQW8 809 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 ATAD3AQ9NVI7 634 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 CTNNAL1Q9UBT7 734 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 SIK3Q9Y2K2 1263 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 AAR2Q9Y312 384 aaKnown RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 E9PCH4 1651 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 TULP2O00295 520 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 RGS5O15539 181 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 MPOP05164 745 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 GSNP06396 782 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 PDGFRBP09619 1106 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 NUDT17P0C025 328 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 LRRC74AQ0VAA2 488 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 Q4G0T1 1027 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 CDC42EP5Q6NZY7 148 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 STRA8Q7Z7C7 330 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 CLVS1Q8IUQ0 354 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 DLG3Q92796 817 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 SH3KBP1Q96B97 665 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 HES6Q96HZ4 224 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 PTPRMP28827 1452 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 TRIM24O15164 1050 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 UBDO15205 165 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 PRPF4O43172 522 aaKnown RBP eCLIP11.38□□□□□ -0.593e-7■■■■□ 23.9
PBRM1-201ENST00000296302 OCM2P0CE71 109 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 OCMP0CE72 109 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 VDRP11473 427 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 TTKP33981 857 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 TP53BP2Q13625 1128 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 BMPR2Q13873 1038 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 RRP1BQ14684 758 aaKnown RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 FUT11Q495W5 492 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 CACHD1Q5VU97 1274 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 FAM9CQ8IZT9 166 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 OTULINQ96BN8 352 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 MMP19Q99542 508 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 SH3GL1Q99961 368 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 PARVBQ9HBI1 364 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 H2AFY2Q9P0M6 372 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 RABGEF1Q9UJ41 708 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 A0A087X0B3 334 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 SMIM31A0A1B0GVY4 71 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 ABLIM1O14639 778 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 TBC1D12O60347 775 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 ATP6V1C1P21283 382 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 ELK3P41970 407 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 PTDSS1P48651 473 aaKnown RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 EIF2B2P49770 351 aaKnown RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 DRG2P55039 364 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms