RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 SYNJ1O43426 1573 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 TFECO14948 347 aaPredicted RBP12.14□□□□□ -0.47
SNIP1-201ENST00000296215 SOX6P35712 828 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 PTPN9P43378 593 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 SF3B4Q15427 424 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNIP1-201ENST00000296215 SYCE2Q6PIF2 218 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 ARMC8Q8IUR7 673 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 IFT22Q9H7X7 185 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 KRT84Q9NSB2 600 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 ATP8A2Q9NTI2 1148 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 PLAGL2Q9UPG8 496 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 CBY1Q9Y3M2 126 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 SNX9Q9Y5X1 595 aa12.14□□□□□ -0.47
SNIP1-201ENST00000296215 KANSL1LA0AUZ9 987 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 C2orf81A6NN90 581 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 P4HBP07237 508 aaKnown RBP12.13□□□□□ -0.47
SNIP1-201ENST00000296215 AMPD1P23109 780 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 FKBP3Q00688 224 aaKnown RBP12.13□□□□□ -0.47
SNIP1-201ENST00000296215 TNFAIP8L3Q5GJ75 292 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 ESX1Q8N693 406 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 NGDNQ8NEJ9 315 aaKnown RBP12.13□□□□□ -0.47
SNIP1-201ENST00000296215 ZFPM2Q8WW38 1151 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 EDEM3Q9BZQ6 932 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 PPCSQ9HAB8 311 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 KIAA1257Q9ULG3 409 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 PLEKHA8P1O95397 391 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 PAHP00439 452 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 RRM2P31350 389 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 RCVRNP35243 200 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 HTR2BP41595 481 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 CTDSPL2Q05D32 466 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 PDK1Q15118 436 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 PXDC1Q5TGL8 231 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 AMIGO1Q86WK6 493 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 CCDC60Q8IWA6 550 aaPredicted RBP12.13□□□□□ -0.47
SNIP1-201ENST00000296215 LILRB1Q8NHL6 650 aaPredicted RBP12.13□□□□□ -0.47
SNIP1-201ENST00000296215 HIPK3Q9H422 1215 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 CNNM1Q9NRU3 951 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 PKD2L1Q9P0L9 805 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 DNAJB4Q9UDY4 337 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 DGKBQ9Y6T7 804 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 MROH7-TTC4A0A0A0MT08 1334 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 ADGRL3Q9HAR2 1447 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 KRBA1A5PL33 1030 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 YKT6O15498 198 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 CCNT2O60583 730 aaKnown RBP12.13□□□□□ -0.47
SNIP1-201ENST00000296215 MAGEC1O60732 1142 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 NR4A2P43354 598 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 ARL4CP56559 192 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
SNIP1-201ENST00000296215 EPC2Q52LR7 807 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 ELMOD1Q8N336 334 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 SHCBP1Q8NEM2 672 aa12.13□□□□□ -0.47
SNIP1-201ENST00000296215 BCL7CQ8WUZ0 217 aaPredicted RBP12.13□□□□□ -0.47
SNIP1-201ENST00000296215 REREQ9P2R6 1566 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 SYNJ2O15056 1496 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 KCNQ3O43525 872 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 DGKIO75912 1065 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 PSKH1P11801 424 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 PCNAP12004 261 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 CRABP2P29373 138 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 WEE1P30291 646 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 GP5P40197 560 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 SLC25A3Q00325 362 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 UGP2Q16851 508 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 RAPH1Q70E73 1250 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 DCP2Q8IU60 420 aaKnown RBP12.12□□□□□ -0.47
SNIP1-201ENST00000296215 FAM47BQ8NA70 645 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 PI4K2BQ8TCG2 481 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 C1orf54Q8WWF1 131 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 JPH3Q8WXH2 748 aaPredicted RBP12.12□□□□□ -0.47
SNIP1-201ENST00000296215 ARMT1Q9H993 441 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 SCN3BQ9NY72 215 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 MAP3K2Q9Y2U5 619 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 COL4A3BPQ9Y5P4 624 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 ST14Q9Y5Y6 855 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 YTHDC2Q9H6S0 1430 aaKnown RBP12.12□□□□□ -0.47
SNIP1-201ENST00000296215 FANCGO15287 622 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 PJA2O43164 708 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 TM7SF2O76062 418 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 FGFR2P21802 821 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 PLD1Q13393 1074 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 DENND5AQ6IQ26 1287 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 SLC22A16Q86VW1 577 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 RAB43Q86YS6 212 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 MTMR8Q96EF0 704 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 CCDC120Q96HB5 630 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 SCYL1Q96KG9 808 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 NUAK2Q9H093 628 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 SEMA6AQ9H2E6 1030 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 KLHL3Q9UH77 587 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 PFDN2Q9UHV9 154 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 GAKO14976 1311 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 YWHABP31946 246 aaKnown RBP12.12□□□□□ -0.47
SNIP1-201ENST00000296215 TXKP42681 527 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 PHKG1Q16816 387 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 ANGPTL8Q6UXH0 198 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 CCDC33Q8N5R6 958 aa12.12□□□□□ -0.47
SNIP1-201ENST00000296215 KBTBD3Q8NAB2 608 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms