RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 UNGP13051 313 aaPredicted RBP23.78■■□□□ 1.4
LINC01116-201ENST00000295549 TNFAIP3P21580 790 aa23.78■■□□□ 1.4
LINC01116-201ENST00000295549 FSHRP23945 695 aa23.78■■□□□ 1.4
LINC01116-201ENST00000295549 SNX16P57768 344 aa23.78■■□□□ 1.4
LINC01116-201ENST00000295549 CDK17Q00537 523 aa23.78■■□□□ 1.4
LINC01116-201ENST00000295549 ADIGQ0VDE8 80 aa23.78■■□□□ 1.4
LINC01116-201ENST00000295549 IFRD2Q12894 506 aaPredicted RBP23.78■■□□□ 1.4
LINC01116-201ENST00000295549 CLEC16AQ2KHT3 1053 aa23.78■■□□□ 1.4
LINC01116-201ENST00000295549 TDRD12Q587J7 1177 aaKnown RBP23.78■■□□□ 1.4
LINC01116-201ENST00000295549 PTCRAQ6ISU1 281 aaPredicted RBP23.78■■□□□ 1.4
LINC01116-201ENST00000295549 SIX6OS1Q8N1H7 587 aa23.78■■□□□ 1.4
LINC01116-201ENST00000295549 PDZD8Q8NEN9 1154 aa23.78■■□□□ 1.4
LINC01116-201ENST00000295549 FBXO32Q969P5 355 aa23.78■■□□□ 1.4
LINC01116-201ENST00000295549 TCEAL4Q96EI5 215 aa23.78■■□□□ 1.4
LINC01116-201ENST00000295549 CPXM1Q96SM3 734 aa23.78■■□□□ 1.4
LINC01116-201ENST00000295549 ARHGAP20Q9P2F6 1191 aa23.78■■□□□ 1.4
LINC01116-201ENST00000295549 MRPS23Q9Y3D9 190 aaKnown RBP23.78■■□□□ 1.4
LINC01116-201ENST00000295549 MOSPD3O75425 235 aa23.77■■□□□ 1.4
LINC01116-201ENST00000295549 FBXO21O94952 628 aa23.77■■□□□ 1.4
LINC01116-201ENST00000295549 ZDHHC11BP0C7U3 371 aa23.77■■□□□ 1.4
LINC01116-201ENST00000295549 SNX30Q5VWJ9 437 aa23.77■■□□□ 1.4
LINC01116-201ENST00000295549 NAA35Q5VZE5 725 aa23.77■■□□□ 1.4
LINC01116-201ENST00000295549 VPS36Q86VN1 386 aa23.77■■□□□ 1.4
LINC01116-201ENST00000295549 MON1AQ86VX9 555 aa23.77■■□□□ 1.4
LINC01116-201ENST00000295549 SHKBP1Q8TBC3 707 aa23.77■■□□□ 1.4
LINC01116-201ENST00000295549 CPA5Q8WXQ8 436 aa23.77■■□□□ 1.4
LINC01116-201ENST00000295549 GCNAQ96QF7 691 aa23.77■■□□□ 1.4
LINC01116-201ENST00000295549 SEPT11Q9NVA2 429 aaKnown RBP23.77■■□□□ 1.4
LINC01116-201ENST00000295549 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.77■■□□□ 1.4
LINC01116-201ENST00000295549 TRPM5Q9NZQ8 1165 aa23.77■■□□□ 1.4
LINC01116-201ENST00000295549 A0A1W2PRU2 124 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 ZNF840PA6NDX5 716 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 E5RJQ4 531 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 TADA3O75528 432 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 USP17L7P0C7H9 530 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 LCP1P13796 627 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 GABRB2P47870 512 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 CENPCQ03188 943 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 PTPN20Q4JDL3 420 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 SPC24Q8NBT2 197 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 SLC30A5Q8TAD4 765 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 ITFG1Q8TB96 612 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 ATXN2LQ8WWM7 1075 aaKnown RBP23.76■■□□□ 1.39
LINC01116-201ENST00000295549 PANX2Q96RD6 677 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 ULBP1Q9BZM6 244 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 ATXN3LQ9H3M9 355 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 CHORDC1Q9UHD1 332 aaPredicted RBP23.76■■□□□ 1.39
LINC01116-201ENST00000295549 MYH10P35580 1976 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 SSU72P8A0A1W2PR75 194 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 SOBPA7XYQ1 873 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 GOLGA6L6A8MZA4 724 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 NRG2O14511 850 aaPredicted RBP23.76■■□□□ 1.39
LINC01116-201ENST00000295549 PLEKP08567 350 aaPredicted RBP23.76■■□□□ 1.39
LINC01116-201ENST00000295549 GZMAP12544 262 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 MAPK8IP2Q13387 824 aaPredicted RBP23.76■■□□□ 1.39
LINC01116-201ENST00000295549 PPP1R2P3Q6NXS1 205 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 ERICH1Q86X53 443 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 SCUBE3Q8IX30 993 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 MSANTD4Q8NCY6 345 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 IRGQQ8WZA9 623 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 MIS12Q9H081 205 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 TLR8Q9NR97 1041 aaKnown RBP23.76■■□□□ 1.39
LINC01116-201ENST00000295549 ADAMTS1Q9UHI8 967 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 ZMYM5Q9UJ78 669 aa23.76■■□□□ 1.39
LINC01116-201ENST00000295549 PATJQ8NI35 1801 aa23.75■■□□□ 1.39
LINC01116-201ENST00000295549 DDX3XO00571 662 aaKnown RBP eCLIP23.75■■□□□ 1.39
LINC01116-201ENST00000295549 SART1O43290 800 aaKnown RBP23.75■■□□□ 1.39
LINC01116-201ENST00000295549 MMP8P22894 467 aa23.75■■□□□ 1.39
LINC01116-201ENST00000295549 NSFP46459 744 aaKnown RBP23.75■■□□□ 1.39
LINC01116-201ENST00000295549 PSEN1P49768 467 aa23.75■■□□□ 1.39
LINC01116-201ENST00000295549 DAOAP59103 153 aa23.75■■□□□ 1.39
LINC01116-201ENST00000295549 MRPS5P82675 430 aaKnown RBP23.75■■□□□ 1.39
LINC01116-201ENST00000295549 IPO4Q8TEX9 1081 aaKnown RBP23.75■■□□□ 1.39
LINC01116-201ENST00000295549 MRPS31Q92665 395 aaKnown RBP23.75■■□□□ 1.39
LINC01116-201ENST00000295549 PHF7Q9BWX1 381 aaPredicted RBP23.75■■□□□ 1.39
LINC01116-201ENST00000295549 SYNCQ9H7C4 482 aa23.75■■□□□ 1.39
LINC01116-201ENST00000295549 GDE1Q9NZC3 331 aa23.75■■□□□ 1.39
LINC01116-201ENST00000295549 GMIPQ9P107 970 aa23.75■■□□□ 1.39
LINC01116-201ENST00000295549 USTQ9Y2C2 406 aa23.75■■□□□ 1.39
LINC01116-201ENST00000295549 GREB1Q4ZG55 1949 aa23.75■■□□□ 1.39
LINC01116-201ENST00000295549 C2orf16Q68DN1 1984 aa23.75■■□□□ 1.39
LINC01116-201ENST00000295549 NOTCH4Q99466 2003 aa23.75■■□□□ 1.39
LINC01116-201ENST00000295549 DOCK6Q96HP0 2047 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 PIK3R2O00459 728 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 PAPSS1O43252 624 aaPredicted RBP23.74■■□□□ 1.39
LINC01116-201ENST00000295549 GJA1P17302 382 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 CEBPBP17676 345 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 DDX6P26196 483 aaKnown RBP eCLIP23.74■■□□□ 1.39
LINC01116-201ENST00000295549 TEAD2Q15562 447 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 ARHGAP15Q53QZ3 475 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 BHLHA9Q7RTU4 235 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 PHF13Q86YI8 300 aaPredicted RBP23.74■■□□□ 1.39
LINC01116-201ENST00000295549 ZDHHC17Q8IUH5 632 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 ARHGAP18Q8N392 663 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 FGF13Q92913 245 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 C18orf8Q96DM3 657 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 TJP2Q9UDY2 1190 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 CDH7Q9ULB5 785 aa23.74■■□□□ 1.39
LINC01116-201ENST00000295549 ZFP37Q9Y6Q3 630 aaPredicted RBP23.74■■□□□ 1.39
LINC01116-201ENST00000295549 SLC34A2O95436 690 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms