RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 VSIG10LQ86VR7 867 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 SIAH1Q8IUQ4 282 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 TMEM165Q9HC07 324 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 MRPL42Q9Y6G3 142 aaKnown RBP13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 LAMA4Q16363 1823 aa13.02□□□□□ -0.33
SLC6A1-201ENST00000287766 ASAP2O43150 1006 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 SNX3O60493 162 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 ZC3H11AO75152 810 aaKnown RBP eCLIP13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 CYP1A2P05177 515 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 ARPP19P56211 112 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 C16orf72Q14CZ0 275 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 CHI3L2Q15782 390 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 FOXR2Q6PJQ5 311 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 FAM83AQ86UY5 434 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 USP33Q8TEY7 942 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 VPS39Q96JC1 886 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 NT5C1AQ9BXI3 368 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 MTO1Q9Y2Z2 717 aaKnown RBP13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 MAPTP10636 758 aaKnown RBP13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 BGNP21810 368 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 RBP5P82980 135 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 R3HDM1Q15032 1099 aaKnown RBP13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 DCAF12L1Q5VU92 463 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 BEST2Q8NFU1 509 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 RSAD1Q9HA92 442 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 ELK3P41970 407 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 EIF1ADQ8N9N8 165 aaKnown RBP13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 MPP4Q96JB8 637 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 WDR35Q9P2L0 1181 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 E7ENQ6 273 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 DNM1LO00429 736 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 DNALI1O14645 258 aaPredicted RBP13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 ESRRBO95718 433 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 MOCS2O96007 188 aaPredicted RBP13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 RPA3P35244 121 aaPredicted RBP13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 ELF3P78545 371 aaPredicted RBP13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 LAMTOR4Q0VGL1 99 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 TRAF7Q6Q0C0 670 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 ARMCX2Q7L311 632 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 TCP10LQ8TDR4 215 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 RXFP2Q8WXD0 754 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 SMARCAD1Q9H4L7 1026 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 NDUFA13Q9P0J0 144 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 PIN4Q9Y237 131 aaKnown RBP13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 LRCH1Q9Y2L9 728 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 UMODL1Q5DID0 1318 aa13.01□□□□□ -0.33
SLC6A1-201ENST00000287766 HLA-DPA1P20036 260 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 GLRA2P23416 452 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 XRRA1Q6P2D8 792 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 MFN1Q8IWA4 741 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 ZNF786Q8N393 782 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 SLC25A41Q8N5S1 370 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 ART4Q93070 314 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 SH3GL1Q99961 368 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 BEGAINQ9BUH8 593 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 OSBPL7Q9BZF2 842 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 MRPL40Q9NQ50 206 aaKnown RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 USP18Q9UMW8 372 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 SERPINB10P48595 397 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 HIRAP54198 1017 aaPredicted RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 PPIDQ08752 370 aaKnown RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 ATP1A4Q13733 1029 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 DCAF6Q58WW2 860 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 LAYNQ6UX15 382 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 LRRC6Q86X45 466 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 CDKL3Q8IVW4 592 aaPredicted RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 C12orf65Q9H3J6 166 aaKnown RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 BTBD7Q9P203 1132 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 IPO11Q9UI26 975 aaKnown RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 A0A087WZ62 844 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 SNRPAP09012 282 aaKnown RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 PTK6Q13882 451 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 APLFQ8IW19 511 aaPredicted RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 HACE1Q8IYU2 909 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 MICU2Q8IYU8 434 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 NUP93Q8N1F7 819 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 SPOCK2Q92563 424 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 FDXACB1Q9BRP7 624 aaPredicted RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 DCUN1D5Q9BTE7 237 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 PAIP1Q9H074 479 aaKnown RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 BRD8Q9H0E9 1235 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 ARMCX1Q9P291 453 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 MYL3P08590 195 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 NUDT17P0C025 328 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 SRGAP2BP0DMP2 458 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 CACNB2Q08289 660 aaPredicted RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 CAPRIN1Q14444 709 aaKnown RBP13□□□□□ -0.33
SLC6A1-201ENST00000287766 KIZQ2M2Z5 673 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 KLC3Q6P597 504 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 ANGPTL8Q6UXH0 198 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 FOXP3Q9BZS1 431 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 ZCWPW1Q9H0M4 648 aa13□□□□□ -0.33
SLC6A1-201ENST00000287766 CHEK2O96017 543 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 MYL2P10916 166 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 EPHB2P29323 1055 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 IL31Q6EBC2 164 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 PLEKHA7Q6IQ23 1121 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 DENND1BQ6P3S1 775 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms