RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CYP24A1Q07973 514 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 TSGA10IPQ3SY00 556 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 PABPC1LQ4VXU2 614 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 PAGE2BQ5JRK9 111 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 CEP78Q5JTW2 689 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 TTC39BQ5VTQ0 682 aaPredicted RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 TTC23Q5W5X9 447 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ARHGAP17Q68EM7 881 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 KRT74Q7RTS7 529 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 CSGALNACT1Q8TDX6 532 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 PANX3Q96QZ0 392 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 C2orf49Q9BVC5 232 aaPredicted RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 KLHL31Q9H511 634 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 RPS6KL1Q9Y6S9 549 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 CACNA1GO43497 2377 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 C15orf38-AP3S2A0A0A6YYH1 394 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 MGRN1O60291 552 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 IGSF6O95976 241 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 THP07101 528 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 RHOCP08134 193 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 VCAM1P19320 739 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 AXLP30530 894 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 PRCPP42785 496 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 UBE3AQ05086 875 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 DDX39BQ13838 428 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 CYLC2Q14093 348 aaPredicted RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ALG11Q2TAA5 492 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 C16orf86Q6ZW13 317 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ARPINQ7Z6K5 226 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 BLOC1S5Q8TDH9 187 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 REXO5Q96IC2 774 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 PLEKHF1Q96S99 279 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 MTFR1LQ9H019 292 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ACTR8Q9H981 624 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 LRRC40Q9H9A6 602 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 FAM196BA6NMK8 535 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 QSOX1O00391 747 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 WBP4O75554 376 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 PABPC1P11940 636 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 CYP11B2P19099 503 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 GRK2P25098 689 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 RPA1P27694 616 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 GRK4P32298 578 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ZNHIT3Q15649 155 aaPredicted RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 NDUFA5Q16718 116 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 GOLGA7BQ2TAP0 167 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 BTNL9Q6UXG8 535 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 PEG10Q86TG7 708 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 NLRP14Q86W24 1093 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 IFNEQ86WN2 208 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 DENND6AQ8IWF6 608 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ANKRD49Q8WVL7 239 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 C1orf54Q8WWF1 131 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 MXRA8Q9BRK3 442 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 EHD4Q9H223 541 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 SERHL2Q9H4I8 314 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 PALMDQ9NP74 551 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 VTA1Q9NP79 307 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 SERHLQ9NQF3 203 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 MBD2Q9UBB5 411 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ITGA11Q9UKX5 1188 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 USP31Q70CQ4 1352 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 TTC26A0AVF1 554 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 PIPSLA2A3N6 862 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 TRIM49BA6NDI0 452 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 PDZK1P1A8MUH7 402 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 KPNA5O15131 536 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 AVILO75366 819 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ANXA6P08133 673 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 MSH3P20585 1137 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ACO1P21399 889 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 S100GP29377 79 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 PTPN7P35236 360 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 RPL3P39023 403 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 MAGEA9P43362 315 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 NAMPTP43490 491 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 KDSRQ06136 332 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 BTG3Q14201 252 aaPredicted RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 TRIP10Q15642 601 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ARMCX4Q5H9R4 360 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 PRR5LQ6MZQ0 368 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 GPAT2Q6NUI2 795 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 KIAA2013Q8IYS2 634 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ADGRF2Q8IZF7 708 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 CAMKK1Q8N5S9 505 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 AHCYL2Q96HN2 611 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 CCT7Q99832 543 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 REEP2Q9BRK0 252 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 RACGAP1Q9H0H5 632 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 TLR8Q9NR97 1041 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ADARB2Q9NS39 739 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 SIK3Q9Y2K2 1263 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 TRIM13O60858 407 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 HMBSP08397 361 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 AKR1A1P14550 325 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 HPCAL1P37235 193 aa4.2□□□□□ -1.74
SCN3A-201ENST00000283254 CLK3P49761 638 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 ALDH18A1P54886 795 aaKnown RBP4.2□□□□□ -1.74
SCN3A-201ENST00000283254 BST2Q10589 180 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms