RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 FAM172AQ8WUF8 416 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 DDX23Q9BUQ8 820 aaKnown RBP23.11■■□□□ 1.29
CCDC7-201ENST00000277657 PCDHB8Q9UN66 801 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 TET1Q8NFU7 2136 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 PRPSAP2O60256 369 aa23.1■■□□□ 1.29
CCDC7-201ENST00000277657 AP1G2O75843 785 aa23.1■■□□□ 1.29
CCDC7-201ENST00000277657 ENDOD1O94919 500 aa23.1■■□□□ 1.29
CCDC7-201ENST00000277657 DESP17661 470 aa23.1■■□□□ 1.29
CCDC7-201ENST00000277657 GBP1P32455 592 aa23.1■■□□□ 1.29
CCDC7-201ENST00000277657 CDO1Q16878 200 aa23.1■■□□□ 1.29
CCDC7-201ENST00000277657 OVOS1Q6IE37 1185 aa23.1■■□□□ 1.29
CCDC7-201ENST00000277657 ZMIZ2Q8NF64 920 aa23.1■■□□□ 1.29
CCDC7-201ENST00000277657 ACBD3Q9H3P7 528 aa23.1■■□□□ 1.29
CCDC7-201ENST00000277657 ZDHHC18Q9NUE0 388 aa23.1■■□□□ 1.29
CCDC7-201ENST00000277657 TMEM30AQ9NV96 361 aa23.1■■□□□ 1.29
CCDC7-201ENST00000277657 GRHL1Q9NZI5 618 aa23.1■■□□□ 1.29
CCDC7-201ENST00000277657 ARSEP51690 589 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 ATN1P54259 1190 aaPredicted RBP23.09■■□□□ 1.29
CCDC7-201ENST00000277657 HDAC4P56524 1084 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 MRPS5P82675 430 aaKnown RBP23.09■■□□□ 1.29
CCDC7-201ENST00000277657 TCTN1Q2MV58 587 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 CRIPAKQ8N1N5 446 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 KCTD6Q8NC69 237 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 TSEN2Q8NCE0 465 aaKnown RBP23.09■■□□□ 1.29
CCDC7-201ENST00000277657 SMARCD1Q96GM5 515 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 LRRC4Q9HBW1 653 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 CSNK1G1Q9HCP0 422 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 NGRNQ9NPE2 291 aaKnown RBP23.09■■□□□ 1.29
CCDC7-201ENST00000277657 SNX24Q9Y343 169 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 PCDHB7Q9Y5E2 793 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 HSF2BPO75031 334 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 CXCL10P02778 98 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 CD48P09326 243 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 RPL21P46778 160 aaKnown RBP23.09■■□□□ 1.29
CCDC7-201ENST00000277657 CACNA2D1P54289 1103 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 KRT17Q04695 432 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 BOLA3Q53S33 107 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 RAB41Q5JT25 222 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 OR10T2Q8NGX3 314 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 TEKT4Q8WW24 435 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 HSPH1Q92598 858 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 MYLPFQ96A32 169 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 TOX2Q96NM4 488 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 TBCBQ99426 244 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 NEU2Q9Y3R4 380 aa23.09■■□□□ 1.29
CCDC7-201ENST00000277657 TTC3P53804 2025 aa23.08■■□□□ 1.29
CCDC7-201ENST00000277657 LIASO43766 372 aa23.08■■□□□ 1.29
CCDC7-201ENST00000277657 HSPA9P38646 679 aaKnown RBP23.08■■□□□ 1.29
CCDC7-201ENST00000277657 RNASELQ05823 741 aaKnown RBP23.08■■□□□ 1.29
CCDC7-201ENST00000277657 FAAP100Q0VG06 881 aa23.08■■□□□ 1.29
CCDC7-201ENST00000277657 PTK6Q13882 451 aa23.08■■□□□ 1.29
CCDC7-201ENST00000277657 PPP1R7Q15435 360 aa23.08■■□□□ 1.29
CCDC7-201ENST00000277657 ZDHHC24Q6UX98 284 aa23.08■■□□□ 1.29
CCDC7-201ENST00000277657 BBS12Q6ZW61 710 aa23.08■■□□□ 1.29
CCDC7-201ENST00000277657 THEM5Q8N1Q8 247 aa23.08■■□□□ 1.29
CCDC7-201ENST00000277657 ADAM33Q9BZ11 813 aa23.08■■□□□ 1.29
CCDC7-201ENST00000277657 HIPK3Q9H422 1215 aa23.08■■□□□ 1.29
CCDC7-201ENST00000277657 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.08■■□□□ 1.29
CCDC7-201ENST00000277657 DNAJB4Q9UDY4 337 aa23.08■■□□□ 1.29
CCDC7-201ENST00000277657 SCN5AQ14524 2016 aa23.08■■□□□ 1.28
CCDC7-201ENST00000277657 HHLA1C9JL84 531 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 FBXO21O94952 628 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 PARNO95453 639 aaKnown RBP23.07■■□□□ 1.28
CCDC7-201ENST00000277657 GAS8O95995 478 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 TFE3P19532 575 aaPredicted RBP23.07■■□□□ 1.28
CCDC7-201ENST00000277657 MATKP42679 507 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 NDUFV1P49821 464 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 TKTL1P51854 596 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 CDR1P51861 262 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 C1orf53Q5VUE5 145 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 SIX6OS1Q8N1H7 587 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 CASD1Q96PB1 797 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 KCNK16Q96T55 309 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 FAM118BQ9BPY3 351 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.07■■□□□ 1.28
CCDC7-201ENST00000277657 DCDC2CA8MYV0 355 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 DAB1O75553 588 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 OR1G1P47890 313 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 GPS2Q13227 327 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 LRRTM3Q86VH5 581 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 NDRG1Q92597 394 aaKnown RBP23.07■■□□□ 1.28
CCDC7-201ENST00000277657 SCLYQ96I15 445 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 FAM193BQ96PV7 902 aaPredicted RBP23.07■■□□□ 1.28
CCDC7-201ENST00000277657 TMLHEQ9NVH6 421 aa23.07■■□□□ 1.28
CCDC7-201ENST00000277657 MDM4O15151 490 aa23.06■■□□□ 1.28
CCDC7-201ENST00000277657 YWHAZP63104 245 aaKnown RBP23.06■■□□□ 1.28
CCDC7-201ENST00000277657 YWHAHQ04917 246 aaPredicted RBP23.06■■□□□ 1.28
CCDC7-201ENST00000277657 BYSLQ13895 437 aaKnown RBP23.06■■□□□ 1.28
CCDC7-201ENST00000277657 MAPRE1Q15691 268 aaKnown RBP23.06■■□□□ 1.28
CCDC7-201ENST00000277657 STRADAQ7RTN6 431 aa23.06■■□□□ 1.28
CCDC7-201ENST00000277657 ABI1Q8IZP0 508 aa23.06■■□□□ 1.28
CCDC7-201ENST00000277657 NKD2Q969F2 451 aaPredicted RBP23.06■■□□□ 1.28
CCDC7-201ENST00000277657 NT5C3BQ969T7 300 aa23.06■■□□□ 1.28
CCDC7-201ENST00000277657 TMEM209Q96SK2 561 aa23.06■■□□□ 1.28
CCDC7-201ENST00000277657 FMO2Q99518 471 aa23.06■■□□□ 1.28
CCDC7-201ENST00000277657 FRMD8P1Q9BZ68 369 aaPredicted RBP23.06■■□□□ 1.28
CCDC7-201ENST00000277657 FAM129AQ9BZQ8 928 aa23.06■■□□□ 1.28
CCDC7-201ENST00000277657 CNGB3Q9NQW8 809 aa23.06■■□□□ 1.28
CCDC7-201ENST00000277657 DNPEPQ9ULA0 475 aa23.06■■□□□ 1.28
CCDC7-201ENST00000277657 DRG1Q9Y295 367 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms