RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TEKT4Q8WW24 435 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 CENPIQ92674 756 aaPredicted RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 CALN1Q9BXU9 219 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 MAK16Q9BXY0 300 aaKnown RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 CAPS2Q9BXY5 557 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 FOXP3Q9BZS1 431 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 NGRNQ9NPE2 291 aaKnown RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 BCCIPQ9P287 314 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 SAE1Q9UBE0 346 aaPredicted RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 CASP8AP2Q9UKL3 1982 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 A0A0U1RQF3 1178 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 DNALI1O14645 258 aaPredicted RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 TRPA1O75762 1119 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 TOMM70O94826 608 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 DESP17661 470 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 NR1D1P20393 614 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 IL4RP24394 825 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 ACAT1P24752 427 aaKnown RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 ACTN2P35609 894 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 LHX1P48742 406 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 RAB27AP51159 221 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 IRAK1P51617 712 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 TFDP2Q14188 446 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 DPYSL3Q14195 570 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 EFHC1Q5JVL4 640 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 KIAA0319Q5VV43 1072 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 DSTYKQ6XUX3 929 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 CROCCP2Q86T23 111 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 PIGZQ86VD9 579 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 MAP7D3Q8IWC1 876 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 PGBD4Q96DM1 585 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 RNF157Q96PX1 679 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 TBCBQ99426 244 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 ADAM2Q99965 735 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 TMEM121Q9BTD3 319 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 C11orf84Q9BUA3 381 aaPredicted RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 DDX23Q9BUQ8 820 aaKnown RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 CDC42EP4Q9H3Q1 356 aaKnown RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 TRMT13Q9NUP7 481 aaKnown RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 DDX43Q9NXZ2 648 aaKnown RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 TPX2Q9ULW0 747 aaKnown RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 NOVA2Q9UNW9 492 aaKnown RBP10.03□□□□□ -0.8
TRIM55-201ENST00000276573 SQORQ9Y6N5 450 aa10.03□□□□□ -0.8
TRIM55-201ENST00000276573 A6NNZ2 444 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 APOC4-APOC2K7ER74 178 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 SGK1O00141 431 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 CLDN5O00501 218 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 CAND2O75155 1236 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 APOC2P02655 101 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 TFE3P19532 575 aaPredicted RBP10.02□□□□□ -0.81
TRIM55-201ENST00000276573 HDAC4P56524 1084 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 SLC8A3P57103 927 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 EIF3EP60228 445 aaKnown RBP10.02□□□□□ -0.81
TRIM55-201ENST00000276573 GPS1Q13098 491 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 UPP1Q16831 310 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 CCDC142Q17RM4 750 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 TUBB8Q3ZCM7 444 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 MDH1BQ5I0G3 518 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 C6orf118Q5T5N4 469 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 HOOK3Q86VS8 718 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 RELL1Q8IUW5 271 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 C3orf58Q8NDZ4 430 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 KCTD13Q8WZ19 329 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 TLCD1Q96CP7 247 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 PWWP2AQ96N64 755 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 ROPN1BQ9BZX4 212 aaPredicted RBP10.02□□□□□ -0.81
TRIM55-201ENST00000276573 ROPN1Q9HAT0 212 aaPredicted RBP10.02□□□□□ -0.81
TRIM55-201ENST00000276573 PCDH9Q9HC56 1237 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 PCDH18Q9HCL0 1135 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 CRTAC1Q9NQ79 661 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 GPATCH2LQ9NWQ4 482 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.02□□□□□ -0.81
TRIM55-201ENST00000276573 NOD1Q9Y239 953 aa10.02□□□□□ -0.81
TRIM55-201ENST00000276573 TLDC2A0PJX2 215 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 CASTOR2A6NHX0 329 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 MDM4O15151 490 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 BEST1O76090 585 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 TTC4O95801 387 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 SKIP12755 728 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 PECAM1P16284 738 aaPredicted RBP10.01□□□□□ -0.81
TRIM55-201ENST00000276573 NPR3P17342 541 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 ATP1A2P50993 1020 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 KRT81Q14533 505 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 KYNUQ16719 465 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 SKIDA1Q1XH10 827 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 ZC3H12AQ5D1E8 599 aaKnown RBP10.01□□□□□ -0.81
TRIM55-201ENST00000276573 ERMARDQ5T6L9 678 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 LRRC31Q6UY01 552 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 CEP128Q6ZU80 1094 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 VSIG1Q86XK7 387 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 UNC45BQ8IWX7 931 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 ZCCHC9Q8N567 271 aaKnown RBP10.01□□□□□ -0.81
TRIM55-201ENST00000276573 ARFGAP2Q8N6H7 521 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 RNF169Q8NCN4 708 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 UHMK1Q8TAS1 419 aaKnown RBP10.01□□□□□ -0.81
TRIM55-201ENST00000276573 RAET1EQ8TD07 263 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 PXYLP1Q8TE99 480 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 PGM2Q96G03 612 aa10.01□□□□□ -0.81
TRIM55-201ENST00000276573 PAAF1Q9BRP4 392 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms