RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 ETNPPLQ8TBG4 499 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 SLC35C1Q96A29 364 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 GMLQ99445 158 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 CGREF1Q99674 301 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 SIAEQ9HAT2 523 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 ZFYVE28Q9HCC9 887 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 MAN1C1Q9NR34 630 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 FTLP02792 175 aaPredicted RBP16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 POLR2MP0CAP2 368 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 ALDH18A1P54886 795 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 UBXN2AP68543 259 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 CTBSQ01459 385 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 SPIRE1Q08AE8 756 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 INAQ16352 499 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 TCHHL1Q5QJ38 904 aaPredicted RBP16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 FAM182AQ5T1J6 154 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 IZUMO3Q5VZ72 239 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 DCLRE1AQ6PJP8 1040 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 KYAT3Q6YP21 454 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 WDR75Q8IWA0 830 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 ZC3H3Q8IXZ2 948 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 SLCO2A1Q92959 643 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 RANBP9Q96S59 729 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 EMSYQ7Z589 1322 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 XPO1O14980 1071 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 CDH3P22223 829 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 TCEA1P23193 301 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 NR1H2P55055 460 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 XIAPP98170 497 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 BCAS3Q9H6U6 928 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 VPS37BQ9H9H4 285 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 MARCOQ9UEW3 520 aaPredicted RBP16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 EBF1Q9UH73 591 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 TAGLN3Q9UI15 199 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 RGPD3A6NKT7 1758 aaPredicted RBP16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 RGPD4Q7Z3J3 1758 aa16.36■□□□□ 0.21
CTDSP1-201ENST00000273062 A8MU76 341 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 ZBTB11O95625 1053 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 PLA2G4BP0C869 781 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 TNFAIP3P21580 790 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 S100A1P23297 94 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 ALDH1A3P47895 512 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 CDK9P50750 372 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 CDKL1Q00532 357 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 PDIA2Q13087 525 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 HIC1Q14526 733 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 PRKD1Q15139 912 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 SEPT7Q16181 437 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 CYP2A13Q16696 494 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 ARHGAP44Q17R89 818 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 AHI1Q8N157 1196 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 SREK1Q8WXA9 508 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 CEP44Q9C0F1 390 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 SACM1LQ9NTJ5 587 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 TYW1Q9NV66 732 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 ZBTB21Q9ULJ3 1066 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 CYP3A7-CYP3A51PA0A087WV96 503 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 GOLGA8TH3BQL2 631 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 PABPC1P11940 636 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 CYP3A7P24462 503 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 MZF1P28698 734 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 OASLQ15646 514 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 CNGA3Q16281 694 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 DNAL1Q4LDG9 190 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 OGFRL1Q5TC84 451 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 NSMFQ6X4W1 530 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 GPBP1Q86WP2 473 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 CATSPER3Q86XQ3 398 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 TMCO5AQ8N6Q1 288 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 MORC4Q8TE76 937 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 HGH1Q9BTY7 390 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 SHCBP1LQ9BZQ2 653 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 PLK2Q9NYY3 685 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 DNAJC12Q9UKB3 198 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 ITM2BQ9Y287 266 aa16.35■□□□□ 0.21
CTDSP1-201ENST00000273062 A6NL46 340 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 KITP10721 976 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 STAT2P52630 851 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 AP3B2Q13367 1082 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 SDR16C5Q8N3Y7 309 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 GLIS1Q8NBF1 620 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 RAB3IL1Q8TBN0 382 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 TTC17Q96AE7 1141 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 MBOAT7Q96N66 472 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 BIRC8Q96P09 236 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 C17orf75Q9HAS0 396 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 TBC1D23Q9NUY8 699 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 FBXO28Q9NVF7 368 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 N6AMT1Q9Y5N5 214 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 NR2E3Q9Y5X4 410 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 CASQ2O14958 399 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 ABHD2P08910 425 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 YWHAGP61981 247 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 PEX6Q13608 980 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 SPOPLQ6IQ16 392 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 TDRPQ86YL5 185 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 RHOT2Q8IXI1 618 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 CYP4F11Q9HBI6 524 aa16.34■□□□□ 0.21
CTDSP1-201ENST00000273062 HERC5Q9UII4 1024 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms