RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 NKIRAS1Q9NYS0 192 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 EFR3BQ9Y2G0 817 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 ARL2BPQ9Y2Y0 163 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 HES2Q9Y543 173 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 PTPRJQ12913 1337 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 TET1Q8NFU7 2136 aa9.15□□□□□ -0.94
TRIM43-201ENST00000272395 A0A1B0GUA9 196 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 MEIS3P2A8K0S8 358 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 VGLL3A8MV65 326 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 TCP11X1B4DZS4 312 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 DNALI1O14645 258 aaPredicted RBP9.14□□□□□ -0.95
TRIM43-201ENST00000272395 LIASO43766 372 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 GJB6O95452 261 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 AMHP03971 560 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 ITGAVP06756 1048 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 FGFR1P11362 822 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 HARSP12081 509 aaKnown RBP9.14□□□□□ -0.95
TRIM43-201ENST00000272395 MYOGP15173 224 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 CDH5P33151 784 aaPredicted RBP9.14□□□□□ -0.95
TRIM43-201ENST00000272395 MAGEA4P43358 317 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 YWHAEP62258 255 aaKnown RBP9.14□□□□□ -0.95
TRIM43-201ENST00000272395 SPRED3Q2MJR0 410 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 CCDC38Q502W7 563 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 ATF7IP2Q5U623 682 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 NOTUMQ6P988 496 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 SLC24A5Q71RS6 500 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 GSTA5Q7RTV2 222 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 POLNQ7Z5Q5 900 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 ECHDC2Q86YB7 292 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 TMEM35BQ8NCS4 154 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 NKD2Q969F2 451 aaPredicted RBP9.14□□□□□ -0.95
TRIM43-201ENST00000272395 FAXDC2Q96IV6 333 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 SLITRK1Q96PX8 696 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 RBM15Q96T37 977 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRIM43-201ENST00000272395 ACO2Q99798 780 aaKnown RBP9.14□□□□□ -0.95
TRIM43-201ENST00000272395 APOL6Q9BWW8 343 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 HEMGNQ9BXL5 484 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 MRPL4Q9BYD3 311 aaKnown RBP9.14□□□□□ -0.95
TRIM43-201ENST00000272395 MTIF3Q9H2K0 278 aaKnown RBP9.14□□□□□ -0.95
TRIM43-201ENST00000272395 NXF3Q9H4D5 531 aaKnown RBP9.14□□□□□ -0.95
TRIM43-201ENST00000272395 CHST12Q9NRB3 414 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRIM43-201ENST00000272395 ANKFY1Q9P2R3 1169 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 PCDHGC3Q9UN70 934 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 SHOC2Q9UQ13 582 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 NUB1Q9Y5A7 615 aa9.14□□□□□ -0.95
TRIM43-201ENST00000272395 TCRBV5S1A1TA0A578 114 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 EFCAB14O75071 495 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 TOM1L1O75674 476 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 CALCAP01258 141 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 ATF7P17544 494 aaPredicted RBP9.13□□□□□ -0.95
TRIM43-201ENST00000272395 AXLP30530 894 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 STX2P32856 288 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 PBX2P40425 430 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 WNT7BP56706 349 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 IL9RQ01113 521 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 PCBP1Q15365 356 aaKnown RBP eCLIP9.13□□□□□ -0.95
TRIM43-201ENST00000272395 TRIP13Q15645 432 aaPredicted RBP9.13□□□□□ -0.95
TRIM43-201ENST00000272395 SGSM1Q2NKQ1 1148 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 P3H1Q32P28 736 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 TFDP3Q5H9I0 405 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 LMBRD2Q68DH5 695 aaPredicted RBP9.13□□□□□ -0.95
TRIM43-201ENST00000272395 SPOPLQ6IQ16 392 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 DNAJC24Q6P3W2 148 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 SPATA21Q7Z572 469 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 PCGF5Q86SE9 256 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 HERC6Q8IVU3 1022 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 ALLCQ8N6M5 410 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 CCDC63Q8NA47 563 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 SMG8Q8ND04 991 aaKnown RBP9.13□□□□□ -0.95
TRIM43-201ENST00000272395 NIF3L1Q9GZT8 377 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 HAPLN2Q9GZV7 340 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 PCDH9Q9HC56 1237 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 KCNK9Q9NPC2 374 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 FAM105AQ9NUU6 356 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 RNF19AQ9NV58 838 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 FGFR1OP2Q9NVK5 253 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 FETUBQ9UGM5 382 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 STRIP2Q9ULQ0 834 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 NAALADL1Q9UQQ1 740 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 CEP83Q9Y592 693 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 LAMA3Q16787 3333 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 A0A0U1RQF3 1178 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 FAM47DPA6NHR8 397 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 SMAPO00193 183 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 ABLIM1O14639 778 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 PRPF4O43172 522 aaKnown RBP eCLIP9.13□□□□□ -0.95
TRIM43-201ENST00000272395 KRT1P04264 644 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 CD58P19256 250 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 AKAP5P24588 427 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 POLR2BP30876 1174 aaKnown RBP9.13□□□□□ -0.95
TRIM43-201ENST00000272395 SSR1P43307 286 aaKnown RBP9.13□□□□□ -0.95
TRIM43-201ENST00000272395 VCPP55072 806 aaKnown RBP9.13□□□□□ -0.95
TRIM43-201ENST00000272395 OSTNP61366 133 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 ELF3P78545 371 aaPredicted RBP9.13□□□□□ -0.95
TRIM43-201ENST00000272395 FAM189BP81408 668 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 PPARDQ03181 441 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 CCDC15Q0P6D6 951 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 LLGL1Q15334 1064 aa9.13□□□□□ -0.95
TRIM43-201ENST00000272395 CCDC142Q17RM4 750 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms