RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 ZBTB44Q8NCP5 570 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 C3orf58Q8NDZ4 430 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 NELL1Q92832 810 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 CLDN23Q96B33 292 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 TCEAL4Q96EI5 215 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 DTNBP1Q96EV8 351 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 CHMP6Q96FZ7 201 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 DHTKD1Q96HY7 919 aaPredicted RBP6.97□□□□□ -1.29
CD53-201ENST00000271324 CALR3Q96L12 384 aaKnown RBP6.97□□□□□ -1.29
CD53-201ENST00000271324 KIFC3Q9BVG8 833 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 NFKBIZQ9BYH8 718 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 FZD8Q9H461 694 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 MAGEF1Q9HAY2 307 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 ANKEF1Q9NU02 776 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 FBXO4Q9UKT5 387 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 NDRG2Q9UN36 371 aaKnown RBP6.97□□□□□ -1.29
CD53-201ENST00000271324 SMG5Q9UPR3 1016 aaKnown RBP6.97□□□□□ -1.29
CD53-201ENST00000271324 NCANO14594 1321 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 GREB1Q4ZG55 1949 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 DENND4CQ5VZ89 1909 aa6.97□□□□□ -1.29
CD53-201ENST00000271324 LRRD1A4D1F6 860 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 PJA2O43164 708 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 ATP2C2O75185 946 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 XYLBO75191 536 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 MED24O75448 989 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 SMNDC1O75940 238 aaKnown RBP eCLIP6.96□□□□□ -1.29
CD53-201ENST00000271324 LCA5LO95447 670 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 ANP32DO95626 131 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 RHOP08100 348 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 FGFR3P22607 806 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 FCARP24071 287 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 HOXA9P31269 272 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 GBP1P32455 592 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 CCR2P41597 374 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 STAT6P42226 847 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 TRAPPC10P48553 1259 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 GRIN1Q05586 938 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 SOX4Q06945 474 aaPredicted RBP6.96□□□□□ -1.29
CD53-201ENST00000271324 DMWDQ09019 674 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 ZRSR2Q15696 482 aaKnown RBP6.96□□□□□ -1.29
CD53-201ENST00000271324 CALCRLQ16602 461 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 TTC38Q5R3I4 469 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 CATSPER3Q86XQ3 398 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 FBF1Q8TES7 1133 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 UBLCP1Q8WVY7 318 aaPredicted RBP6.96□□□□□ -1.29
CD53-201ENST00000271324 CCT6BQ92526 530 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 DDX27Q96GQ7 796 aaKnown RBP6.96□□□□□ -1.29
CD53-201ENST00000271324 ZSWIM3Q96MP5 696 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 RAB3IPQ96QF0 476 aaPredicted RBP6.96□□□□□ -1.29
CD53-201ENST00000271324 TSC22D3Q99576 134 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 TUBGCP2Q9BSJ2 902 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 OSBPL6Q9BZF3 934 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 LACRTQ9GZZ8 138 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 CCDC113Q9H0I3 377 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 ISCUQ9H1K1 167 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 TMEM60Q9H2L4 133 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 SLC39A2Q9NP94 309 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 RBM12Q9NTZ6 932 aaKnown RBP6.96□□□□□ -1.29
CD53-201ENST00000271324 PRMT7Q9NVM4 692 aaPredicted RBP6.96□□□□□ -1.29
CD53-201ENST00000271324 ZSCAN32Q9NX65 697 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 MTRRQ9UBK8 725 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 MRPS23Q9Y3D9 190 aaKnown RBP6.96□□□□□ -1.29
CD53-201ENST00000271324 PCDHGA2Q9Y5H1 932 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 CAPN6Q9Y6Q1 641 aa6.96□□□□□ -1.29
CD53-201ENST00000271324 LAMA5O15230 3695 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 CNOT1A5YKK6 2376 aaKnown RBP6.96□□□□□ -1.3
CD53-201ENST00000271324 NUP210Q8TEM1 1887 aaPredicted RBP6.96□□□□□ -1.3
CD53-201ENST00000271324 WDR27A2RRH5 827 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 ARHGAP33O14559 1287 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 SPTLC1O15269 473 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 ECI2O75521 394 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 WFS1O76024 890 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 B3GAT3O94766 335 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 SEC24AO95486 1093 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 PRKCBP05771 671 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 CLTAP09496 248 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 SETSIPP0DME0 302 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 TDGF1P13385 188 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 GJA1P17302 382 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 HNRNPH3P31942 346 aaKnown RBP6.96□□□□□ -1.3
CD53-201ENST00000271324 LONP1P36776 959 aaKnown RBP6.96□□□□□ -1.3
CD53-201ENST00000271324 MAGEA1P43355 309 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 CARSP49589 748 aaKnown RBP6.96□□□□□ -1.3
CD53-201ENST00000271324 SH3BGRP55822 239 aaPredicted RBP6.96□□□□□ -1.3
CD53-201ENST00000271324 ARPP19P56211 112 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 MRPS35P82673 323 aaKnown RBP6.96□□□□□ -1.3
CD53-201ENST00000271324 PFKPQ01813 784 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 SPEM2Q0P670 501 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 SRSF5Q13243 272 aaKnown RBP6.96□□□□□ -1.3
CD53-201ENST00000271324 PRPF4BQ13523 1007 aaKnown RBP6.96□□□□□ -1.3
CD53-201ENST00000271324 UPP1Q16831 310 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 FAM187BQ17R55 369 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 TMEM132AQ24JP5 1023 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 FAM78AQ5JUQ0 283 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 PRSS36Q5K4E3 855 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 ZNF852Q6ZMS4 543 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 GPIHBP1Q8IV16 184 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 HS6ST3Q8IZP7 471 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 CSGALNACT2Q8N6G5 542 aa6.96□□□□□ -1.3
CD53-201ENST00000271324 ZNF507Q8TCN5 953 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms