RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 GREB1Q4ZG55 1949 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 ZDHHC11BP0C7U3 371 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 PDE6CP51160 858 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 ADIGQ0VDE8 80 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 MEA1Q16626 185 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 FIGNQ5HY92 759 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 IRF2BP2Q7Z5L9 587 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 SCD5Q86SK9 330 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 VSTM4Q8IW00 320 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 PLCD3Q8N3E9 789 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 ZSCAN18Q8TBC5 510 aaPredicted RBP13.44□□□□□ -0.26
SS18-202ENST00000269138 FGF14Q92915 247 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 NUP58Q9BVL2 599 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 EDEM3Q9BZQ6 932 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 TRIM5Q9C035 493 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 LHX5Q9H2C1 402 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 NMUR1Q9HB89 426 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 OSER1Q9NX31 292 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 TJP2Q9UDY2 1190 aa13.44□□□□□ -0.26
SS18-202ENST00000269138 ZFP37Q9Y6Q3 630 aaPredicted RBP13.44□□□□□ -0.26
SS18-202ENST00000269138 DOCK8Q8NF50 2099 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 MYH10P35580 1976 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 NCANO14594 1321 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 ITIH6Q6UXX5 1313 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 A0A1W2PQH9 124 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 ANHXE9PGG2 379 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 PRAMEF12O95522 483 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 GYPCP04921 128 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 FCARP24071 287 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 VIPR2P41587 438 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 RPL34P49207 117 aaKnown RBP13.43□□□□□ -0.26
SS18-202ENST00000269138 FMO1Q01740 532 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 HTR4Q13639 388 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 TANGO2Q6ICL3 276 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 BHLHA9Q7RTU4 235 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 CCDC186Q7Z3E2 898 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 RNF135Q8IUD6 432 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 ARID3BQ8IVW6 561 aaPredicted RBP13.43□□□□□ -0.26
SS18-202ENST00000269138 ARL14EPQ8N8R7 260 aaPredicted RBP13.43□□□□□ -0.26
SS18-202ENST00000269138 C1orf131Q8NDD1 294 aaKnown RBP13.43□□□□□ -0.26
SS18-202ENST00000269138 CLEC4CQ8WTT0 213 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 OVCA2Q8WZ82 227 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 SMARCD2Q92925 531 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 RSPRY1Q96DX4 576 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 HSFY1Q96LI6 401 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 ASB16Q96NS5 453 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 PCDHB18PQ96TA0 734 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 KXD1Q9BQD3 176 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 SLC4A5Q9BY07 1137 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 PLA2G2FQ9BZM2 168 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 RNF38Q9H0F5 515 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 PDCL3Q9H2J4 239 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 KCNK12Q9HB15 430 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 ST7Q9NRC1 585 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 MYO6Q9UM54 1294 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 CAPN11Q9UMQ6 739 aa13.43□□□□□ -0.26
SS18-202ENST00000269138 A0A1W2PQJ5 194 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 ZBED1O96006 694 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 FERP16591 822 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 PPP3CCP48454 512 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 CDR2Q01850 454 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 PDCLQ13371 301 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 ASIC2Q16515 512 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 SFMBT2Q5VUG0 894 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 SNX30Q5VWJ9 437 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 SPECC1LQ69YQ0 1117 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 PM20D1Q6GTS8 502 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 SCUBE3Q8IX30 993 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 CMTM8Q8IZV2 173 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 SIX6OS1Q8N1H7 587 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 PDZD8Q8NEN9 1154 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 STK32AQ8WU08 396 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 LRRC3BQ96PB8 259 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 CPXM1Q96SM3 734 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 MIS12Q9H081 205 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 CCSER2Q9H7U1 834 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 TLR8Q9NR97 1041 aaKnown RBP13.42□□□□□ -0.26
SS18-202ENST00000269138 AIPL1Q9NZN9 384 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 NUDT5Q9UKK9 219 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 NUMBLQ9Y6R0 609 aa13.42□□□□□ -0.26
SS18-202ENST00000269138 A0A0C4DFX4 3053 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 PATJQ8NI35 1801 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 YJEFN3A6XGL0 299 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 E5RJQ4 531 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 E7ENQ6 273 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 TBX18O95935 607 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 OAS1P00973 400 aaKnown RBP13.41□□□□□ -0.26
SS18-202ENST00000269138 SKILP12757 684 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 HDCP19113 662 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 DDX6P26196 483 aaKnown RBP eCLIP13.41□□□□□ -0.26
SS18-202ENST00000269138 CASP14P31944 242 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 ZNF75DP51815 510 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 DAOAP59103 153 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 GOLGA8FQ08AF8 430 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 GOLGA8DPQ0D2H9 430 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 NAA35Q5VZE5 725 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 HFE2Q6ZVN8 426 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 TMEM110Q86TL2 294 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 OLIG1Q8TAK6 271 aa13.41□□□□□ -0.26
SS18-202ENST00000269138 CPA5Q8WXQ8 436 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms