RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 NR1H3Q13133 447 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 GRB14Q14449 540 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 FASTKD3Q14CZ7 662 aaKnown RBP16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CDR2LQ86X02 465 aaPredicted RBP16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SHCBP1Q8NEM2 672 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 OR5B17Q8NGF7 314 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PTCD3Q96EY7 689 aaKnown RBP16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 TCHPQ9BT92 498 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 HEY2Q9UBP5 337 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 NEU2Q9Y3R4 380 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 COMMD3-BMI1R4GMX3 469 aa16.66■□□□□ 0.26
MAP1LC3B-201ENST00000268607 MANSC4A6NHS7 340 aaPredicted RBP16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 VNN1O95497 513 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SMPD1P17405 629 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 MAN1A1P33908 653 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ARL2P36404 184 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SFSWAPQ12872 951 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 THOC5Q13769 683 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PRPF31Q8WWY3 499 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 VTI1AQ96AJ9 217 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CFAP57Q96MR6 1250 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 TINF2Q9BSI4 451 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 MAK16Q9BXY0 300 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 C12orf65Q9H3J6 166 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 STX18Q9P2W9 335 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 GTF3C4Q9UKN8 822 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CHMP2BQ9UQN3 213 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 UMODL1Q5DID0 1318 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PLXNB2O15031 1838 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 UNCXA6NJT0 531 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 HNRNPCL1O60812 293 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CETN2P41208 172 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 TNFSF9P41273 254 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 CAPSQ13938 189 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 TTLL4Q14679 1199 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 P3H1Q32P28 736 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 YIPF2Q9BWQ6 316 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 APOBEC3GQ9HC16 384 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ANAPC7Q9UJX3 599 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ARID2Q68CP9 1835 aa16.65■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ASB14A6NK59 587 aa16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 TYROBPO43914 113 aa16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ZWINTO95229 277 aa16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 C4BPAP04003 597 aaKnown RBP16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 TROVE2P10155 538 aaKnown RBP eCLIP16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 ADRA1DP25100 572 aa16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 WDR44Q5JSH3 913 aa16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 C17orf99Q6UX52 265 aa16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SMC1BQ8NDV3 1235 aa16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 NSL1Q96IY1 281 aa16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 VPS37BQ9H9H4 285 aa16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 FBXO6Q9NRD1 293 aaPredicted RBP16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 UVRAGQ9P2Y5 699 aa16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 HSFX1Q9UBD0 423 aa16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 SLC45A1Q9Y2W3 748 aa16.64■□□□□ 0.26
MAP1LC3B-201ENST00000268607 PLXNA1Q9UIW2 1896 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZSWIM8A7E2V4 1837 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 DYNC1LI2O43237 492 aaPredicted RBP16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 STRNO43815 780 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ABHD2P08910 425 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TGFB3P10600 412 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 RALAP11233 206 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 AMPD1P23109 780 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MAPK4P31152 587 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GTF2H1P32780 548 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 NAMPTP43490 491 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ARHGAP1Q07960 439 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 PSMD6Q15008 389 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GSTA3Q16772 222 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZACNQ401N2 412 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TMEM270Q6UE05 265 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 C15orf39Q6ZRI6 1047 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GSTA5Q7RTV2 222 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 RELL1Q8IUW5 271 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 PDCD7Q8N8D1 485 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CCDC89Q8N998 374 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CENPKQ9BS16 269 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ALG13Q9NP73 1137 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TAS2R1Q9NYW7 299 aa16.64■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TNPO2O14787 897 aaKnown RBP16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 KRT4P19013 534 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 SERPINB3P29508 390 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 SLC18A1P54219 525 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ACAD10Q6JQN1 1059 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 NR1H4Q96RI1 486 aaPredicted RBP16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 KATNBL1Q9H079 304 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 NRBP2Q9NSY0 501 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GABRQQ9UN88 632 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 EVPLQ92817 2033 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 PIAS1O75925 651 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 OSTNP61366 133 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GCNT1Q02742 428 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TRIM32Q13049 653 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZCCHC9Q8N567 271 aaKnown RBP16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 BBOF1Q8ND07 529 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CFAP61Q8NHU2 1237 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZNF212Q9UDV6 495 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 IGKV6D-21A0A0A0MT36 114 aa16.63■□□□□ 0.25
MAP1LC3B-201ENST00000268607 C2orf71A6NGG8 1288 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms