RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 TYMPP19971 482 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-201ENST00000266589 RABGGTBP53611 331 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 CCL23P55773 120 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 KRT17Q04695 432 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 ADCY1Q08828 1119 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 PPP1R7Q15435 360 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 EFHC1Q5JVL4 640 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 SCYL2Q6P3W7 929 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 CYP4V2Q6ZWL3 525 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-201ENST00000266589 ARCQ7LC44 396 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 OR10T2Q8NGX3 314 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 GRK7Q8WTQ7 553 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 NDRG1Q92597 394 aaKnown RBP12.1□□□□□ -0.47
SCAF11-201ENST00000266589 FAM149B1Q96BN6 582 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 ZBTB9Q96C00 473 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 SMARCD1Q96GM5 515 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 KCNK16Q96T55 309 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 SMOQ99835 787 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.1□□□□□ -0.47
SCAF11-201ENST00000266589 DNAJB4Q9UDY4 337 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 LRFN2Q9ULH4 789 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 PRG3Q9Y2Y8 225 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-201ENST00000266589 SNX24Q9Y343 169 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 NLRC5Q86WI3 1866 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 DCDC2CA8MYV0 355 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 HSF2BPO75031 334 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 TFE3P19532 575 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-201ENST00000266589 PTPN9P43378 593 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 TKTL1P51854 596 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 CACNA2D1P54289 1103 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 MRPS5P82675 430 aaKnown RBP12.1□□□□□ -0.47
SCAF11-201ENST00000266589 YWHAHQ04917 246 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-201ENST00000266589 FAAP100Q0VG06 881 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 TRIM60Q495X7 471 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 FAM171BQ6P995 826 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 THEM5Q8N1Q8 247 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 TSEN2Q8NCE0 465 aaKnown RBP12.1□□□□□ -0.47
SCAF11-201ENST00000266589 ZMIZ2Q8NF64 920 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 CMASQ8NFW8 434 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-201ENST00000266589 TMEM209Q96SK2 561 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 RHOBTB2Q9BYZ6 727 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 PPP1R12CQ9BZL4 782 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 CRISPLD2Q9H0B8 497 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 TMEM30AQ9NV96 361 aa12.1□□□□□ -0.47
SCAF11-201ENST00000266589 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.1□□□□□ -0.47
SCAF11-201ENST00000266589 TMEM189-UBE2V1I3L0A0 370 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 LIASO43766 372 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 GAS8O95995 478 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 RPL21P46778 160 aaKnown RBP12.09□□□□□ -0.47
SCAF11-201ENST00000266589 NDUFV1P49821 464 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 GATMP50440 423 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 DRG2P55039 364 aaKnown RBP12.09□□□□□ -0.47
SCAF11-201ENST00000266589 HDAC4P56524 1084 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 CBX1P83916 185 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 TAZQ16635 292 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 ATL2Q8NHH9 583 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 HAUS1Q96CS2 278 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 PKMYT1Q99640 499 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 C11orf84Q9BUA3 381 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-201ENST00000266589 CALN1Q9BXU9 219 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 TMLHEQ9NVH6 421 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 FEZ2Q9UHY8 353 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-201ENST00000266589 EFR3BQ9Y2G0 817 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 PTPRDP23468 1912 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 DAB1O75553 588 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 CYP2C18P33260 490 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 MATKP42679 507 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 CDH6P55285 790 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 DYNLT1P63172 113 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 TSPY1Q01534 308 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 TLE2Q04725 743 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 GPS2Q13227 327 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 SYDE1Q6ZW31 735 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-201ENST00000266589 GPRIN1Q7Z2K8 1008 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 LRRTM3Q86VH5 581 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 DEFB106AQ8N104 65 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 MREGQ8N565 214 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 DIS3LQ8TF46 1054 aaKnown RBP12.09□□□□□ -0.47
SCAF11-201ENST00000266589 CENPIQ92674 756 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-201ENST00000266589 ZNF333Q96JL9 665 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 CASD1Q96PB1 797 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 NCAPGQ9BPX3 1015 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 DDX23Q9BUQ8 820 aaKnown RBP12.09□□□□□ -0.47
SCAF11-201ENST00000266589 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 ULBP1Q9BZM6 244 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 GRHL1Q9NZI5 618 aa12.09□□□□□ -0.47
SCAF11-201ENST00000266589 TTC3P53804 2025 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.08□□□□□ -0.48
SCAF11-201ENST00000266589 CST8O60676 142 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 FBXO21O94952 628 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 CXCL10P02778 98 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 BDNFP23560 247 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 GBP1P32455 592 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 ARSEP51690 589 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 ATXN1P54253 815 aaKnown RBP12.08□□□□□ -0.48
SCAF11-201ENST00000266589 BCAR1P56945 870 aa12.08□□□□□ -0.48
SCAF11-201ENST00000266589 YWHAZP63104 245 aaKnown RBP12.08□□□□□ -0.48
SCAF11-201ENST00000266589 PTK6Q13882 451 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms