RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 TRPM4Q8TD43 1214 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 NIF3L1Q9GZT8 377 aa16.4■□□□□ 0.22
SHANK3-201ENST00000262795 CDK12Q9NYV4 1490 aaPredicted RBP16.39■□□□□ 0.21
SHANK3-201ENST00000262795 LHX1P48742 406 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 FMO5P49326 533 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 CCDC144BQ3MJ40 725 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 DEPDC1Q5TB30 811 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 HOMEZQ8IX15 550 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 BTBD9Q96Q07 612 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 ARHGAP9Q9BRR9 750 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 C1QTNF7Q9BXJ2 289 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 MRPL9Q9BYD2 267 aaKnown RBP16.39■□□□□ 0.21
SHANK3-201ENST00000262795 UTP6Q9NYH9 597 aaKnown RBP16.39■□□□□ 0.21
SHANK3-201ENST00000262795 NKRFO15226 690 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■■□□□ 14
SHANK3-201ENST00000262795 CCDC130P13994 396 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 PTAR1Q7Z6K3 402 aaPredicted RBP16.39■□□□□ 0.21
SHANK3-201ENST00000262795 ARHGEF26Q96DR7 871 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 USP18Q9UMW8 372 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 KATNA1O75449 491 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 PTGER2P43116 358 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 SERPINB4P48594 390 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 RASAL3Q86YV0 1011 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 FICDQ9BVA6 458 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 TRBV23OR9-2A0A075B6M9 112 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 KDSRQ06136 332 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 DSG4Q86SJ6 1040 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 GTPBP2Q9BX10 602 aaKnown RBP16.39■□□□□ 0.21
SHANK3-201ENST00000262795 PIF1Q9H611 641 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 GSAPA4D1B5 854 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 ACSL4O60488 711 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 MFAP3LO75121 409 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 CFIP05156 583 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 TBX4P57082 545 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 ZNF669Q96BR6 464 aaPredicted RBP16.39■□□□□ 0.21
SHANK3-201ENST00000262795 NDEL1Q9GZM8 345 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 TSC22D4Q9Y3Q8 395 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 ALKQ9UM73 1620 aa16.39■□□□□ 0.21
SHANK3-201ENST00000262795 LGALS16A8MUM7 142 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 FGBP02675 491 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 MMEP08473 750 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 FLT3LGP49771 235 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 PIGHQ14442 188 aaPredicted RBP16.38■□□□□ 0.21
SHANK3-201ENST00000262795 FRMD5Q7Z6J6 570 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 ENO3P13929 434 aaPredicted RBP16.38■□□□□ 0.21
SHANK3-201ENST00000262795 CENPPQ6IPU0 288 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 CYP4F12Q9HCS2 524 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 PVALEFA0A1B0GWK0 134 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 DSG3P32926 999 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 LAMB3Q13751 1172 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 FAM131BQ86XD5 332 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 DDX42Q86XP3 938 aaKnown RBP eCLIP16.38■□□□□ 0.21
SHANK3-201ENST00000262795 CLASP1Q7Z460 1538 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 SHROOM1Q2M3G4 852 aaPredicted RBP16.38■□□□□ 0.21
SHANK3-201ENST00000262795 CAPN1P07384 714 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 ALDH5A1P51649 535 aaPredicted RBP16.38■□□□□ 0.21
SHANK3-201ENST00000262795 PLA2G4EQ3MJ16 856 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 SDHAF4Q5VUM1 108 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 ICA1LQ8NDH6 482 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 USP13Q92995 863 aaPredicted RBP16.38■□□□□ 0.21
SHANK3-201ENST00000262795 RUSC1Q9BVN2 902 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 ABHD16BQ9H3Z7 469 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 ATP13A1Q9HD20 1204 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 TBC1D3DA0A087WVF3 549 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 TBC1D3IA0A087WXS9 549 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 TBC1D3EA0A087X179 549 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 TBC1D3KA0A087X1G2 549 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 TBC1D3FA6NER0 549 aaPredicted RBP16.38■□□□□ 0.21
SHANK3-201ENST00000262795 TBC1D3LB9A6J9 549 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 TBX3O15119 743 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 TBC1D3HP0C7X1 549 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 TBC1D3GQ6DHY5 549 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 TBC1D3CQ6IPX1 549 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 TBC1D3Q8IZP1 549 aaPredicted RBP16.38■□□□□ 0.21
SHANK3-201ENST00000262795 MYO1HQ8N1T3 1032 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 VPS37AQ8NEZ2 397 aa16.38■□□□□ 0.21
SHANK3-201ENST00000262795 MORC2Q9Y6X9 1032 aaPredicted RBP16.38■□□□□ 0.21
SHANK3-201ENST00000262795 TMEM150BA6NC51 233 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 ZBTB39O15060 712 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 ERN1O75460 977 aaKnown RBP16.37■□□□□ 0.21
SHANK3-201ENST00000262795 CBWD3Q5JTY5 395 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 CBWD5Q5RIA9 395 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 PDXDC1Q6P996 788 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 CYP20A1Q6UW02 462 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 TMC2Q8TDI7 906 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 RELTQ969Z4 430 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 SARM1Q6SZW1 724 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 RNF44Q7L0R7 432 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 GATAD2AQ86YP4 633 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 ADGRE3Q9BY15 652 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 ZNF229Q9UJW7 825 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 ATP5BP06576 529 aaKnown RBP16.37■□□□□ 0.21
SHANK3-201ENST00000262795 ENO1P06733 434 aaKnown RBP16.37■□□□□ 0.21
SHANK3-201ENST00000262795 MTHFD1LQ6UB35 978 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 VSTM4Q8IW00 320 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 CLEC4FQ8N1N0 589 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 UXTQ9UBK9 157 aaPredicted RBP16.37■□□□□ 0.21
SHANK3-201ENST00000262795 MIF4GDA9UHW6 222 aaKnown RBP16.37■□□□□ 0.21
SHANK3-201ENST00000262795 IRF6O14896 467 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 UMPSP11172 480 aa16.37■□□□□ 0.21
SHANK3-201ENST00000262795 ADIGQ0VDE8 80 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms