RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 PTPN7P35236 360 aa18.72■□□□□ 0.59
TRAF4-201ENST00000262395 FSTL1Q12841 308 aa18.72■□□□□ 0.59
TRAF4-201ENST00000262395 XKR3Q5GH77 459 aa18.72■□□□□ 0.59
TRAF4-201ENST00000262395 SMC1BQ8NDV3 1235 aa18.72■□□□□ 0.59
TRAF4-201ENST00000262395 EBF4Q9BQW3 602 aa18.72■□□□□ 0.59
TRAF4-201ENST00000262395 CNTN3Q9P232 1028 aa18.72■□□□□ 0.59
TRAF4-201ENST00000262395 KIAA1217Q5T5P2 1943 aa18.72■□□□□ 0.59
TRAF4-201ENST00000262395 I3L4J1 428 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 VWA5AO00534 786 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 KRT7P08729 469 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 CWF19L1Q69YN2 538 aaKnown RBP18.71■□□□□ 0.59
TRAF4-201ENST00000262395 SLFN12LQ6IEE8 588 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 CHSY1Q86X52 802 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 SCUBE1Q8IWY4 988 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 UBR7Q8N806 425 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 GPRASP2Q96D09 838 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 MMP19Q99542 508 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 NIF3L1Q9GZT8 377 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 PCMTD2Q9NV79 361 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 HEY1Q9Y5J3 304 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 TEX264Q9Y6I9 313 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 WDR81Q562E7 1941 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 A0A1B0GVG6 124 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 PRR5-ARHGAP8B1AHC4 643 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 SRGAP2CP0DJJ0 459 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 ARHGAP8P85298 464 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 SLC18A2Q05940 514 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 MROH9Q5TGP6 573 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 THNSL1Q8IYQ7 743 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 FGD4Q96M96 766 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 PHACTR1Q9C0D0 580 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 ASCC2Q9H1I8 757 aaPredicted RBP18.71■□□□□ 0.59
TRAF4-201ENST00000262395 PORCNQ9H237 461 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 GPATCH2LQ9NWQ4 482 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 FETUBQ9UGM5 382 aa18.71■□□□□ 0.59
TRAF4-201ENST00000262395 LSM8O95777 96 aaKnown RBP18.7■□□□□ 0.58
TRAF4-201ENST00000262395 LDHAP00338 332 aaKnown RBP18.7■□□□□ 0.58
TRAF4-201ENST00000262395 ERBB2P04626 1255 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 ANPEPP15144 967 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 RTP1P59025 263 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 MRPS5P82675 430 aaKnown RBP18.7■□□□□ 0.58
TRAF4-201ENST00000262395 ROR1Q01973 937 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 KRT72Q14CN4 511 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 ZNF699Q32M78 642 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 C1orf146Q5VVC0 180 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 TTLL6Q8N841 843 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 TTC13Q8NBP0 860 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 SLC7A3Q8WY07 619 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 E2F7Q96AV8 911 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 SMYD3Q9H7B4 428 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 SMYD2Q9NRG4 433 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 WDR35Q9P2L0 1181 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 PPM1HQ9ULR3 514 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 COL2A1P02458 1487 aaPredicted RBP18.7■□□□□ 0.58
TRAF4-201ENST00000262395 ANKRD33BA6NCL7 494 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 PEX10O60683 326 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 SORBS2O94875 1100 aaKnown RBP18.7■□□□□ 0.58
TRAF4-201ENST00000262395 TGDSO95455 350 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 CDH6P55285 790 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 ZC3H12AQ5D1E8 599 aaKnown RBP18.7■□□□□ 0.58
TRAF4-201ENST00000262395 POU5F2Q8N7G0 328 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 RDM1Q8NG50 284 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 USP6NLQ92738 828 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 PEBP4Q96S96 227 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRAF4-201ENST00000262395 ZNF646O15015 1829 aaPredicted RBP18.7■□□□□ 0.58
TRAF4-201ENST00000262395 H0YCG3 227 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 RAB27AP51159 221 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 GHRHRQ02643 423 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 CAPSQ13938 189 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 POLNQ7Z5Q5 900 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 NUDCD3Q8IVD9 361 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 ULK2Q8IYT8 1036 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.7■□□□□ 0.582e-10■□□□□ 9.7
TRAF4-201ENST00000262395 NIPA2Q8N8Q9 360 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 HIPK4Q8NE63 616 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 TRIM4Q9C037 500 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 HMGXB4Q9UGU5 601 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 SLC7A8Q9UHI5 535 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 MAD1L1Q9Y6D9 718 aa18.7■□□□□ 0.58
TRAF4-201ENST00000262395 ADGRA2Q96PE1 1338 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 APOC4-APOC2K7ER74 178 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 ABLIM1O14639 778 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 KCNN4O15554 427 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 TBC1D12O60347 775 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 APOC2P02655 101 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 APRTP07741 180 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 SUPT20HL2P0C7V6 817 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 ZRSR2Q15696 482 aaKnown RBP18.69■□□□□ 0.58
TRAF4-201ENST00000262395 C15orf59Q2T9L4 293 aaPredicted RBP18.69■□□□□ 0.58
TRAF4-201ENST00000262395 SUPT20HL1Q3ZLR7 823 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 SLC26A11Q86WA9 606 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 EFCAB3Q8N7B9 438 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 GATA6Q92908 595 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 TUBGCP5Q96RT8 1024 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 ZNF302Q9NR11 478 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 ZNF212Q9UDV6 495 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 ZC3H7BQ9UGR2 993 aaKnown RBP18.69■□□□□ 0.58
TRAF4-201ENST00000262395 USP18Q9UMW8 372 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 EIF4BP23588 611 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms