RNA–Protein interactions for RNA: ENST00000262053.7

ATF1-201, Transcript of activating transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-201ENST00000262053 SLC13A4Q9UKG4 626 aa2.55□□□□□ -2
ATF1-201ENST00000262053 HDAC9Q9UKV0 1011 aa2.55□□□□□ -2
ATF1-201ENST00000262053 SHOC2Q9UQ13 582 aa2.55□□□□□ -2
ATF1-201ENST00000262053 MTO1Q9Y2Z2 717 aaKnown RBP2.55□□□□□ -2
ATF1-201ENST00000262053 REXO2Q9Y3B8 237 aaKnown RBP2.55□□□□□ -2
ATF1-201ENST00000262053 NEU2Q9Y3R4 380 aa2.55□□□□□ -2
ATF1-201ENST00000262053 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.55□□□□□ -2
ATF1-201ENST00000262053 HS3ST3A1Q9Y663 406 aa2.55□□□□□ -2
ATF1-201ENST00000262053 CDY1Q9Y6F8 540 aa2.55□□□□□ -2
ATF1-201ENST00000262053 PTPRKQ15262 1439 aa2.55□□□□□ -2
ATF1-201ENST00000262053 A0A0B4J269 797 aa2.54□□□□□ -2
ATF1-201ENST00000262053 GOLGA6L6A8MZA4 724 aa2.54□□□□□ -2
ATF1-201ENST00000262053 J3KRW8 73 aa2.54□□□□□ -2
ATF1-201ENST00000262053 EIF3FO00303 357 aaPredicted RBP2.54□□□□□ -2
ATF1-201ENST00000262053 DCLK1O15075 740 aa2.54□□□□□ -2
ATF1-201ENST00000262053 DHHO43323 396 aa2.54□□□□□ -2
ATF1-201ENST00000262053 RRP9O43818 475 aaKnown RBP2.54□□□□□ -2
ATF1-201ENST00000262053 NDUFA10O95299 355 aa2.54□□□□□ -2
ATF1-201ENST00000262053 AGR2O95994 175 aa2.54□□□□□ -2
ATF1-201ENST00000262053 TPH1P17752 444 aa2.54□□□□□ -2
ATF1-201ENST00000262053 CDK7P50613 346 aa2.54□□□□□ -2
ATF1-201ENST00000262053 PNLIPRP1P54315 467 aa2.54□□□□□ -2
ATF1-201ENST00000262053 LOXL3P58215 753 aa2.54□□□□□ -2
ATF1-201ENST00000262053 TLE2Q04725 743 aa2.54□□□□□ -2
ATF1-201ENST00000262053 MGAT5BQ3V5L5 792 aa2.54□□□□□ -2
ATF1-201ENST00000262053 PLA1AQ53H76 456 aa2.54□□□□□ -2
ATF1-201ENST00000262053 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.54□□□□□ -2
ATF1-201ENST00000262053 HYIQ5T013 277 aa2.54□□□□□ -2
ATF1-201ENST00000262053 TMTC4Q5T4D3 741 aa2.54□□□□□ -2
ATF1-201ENST00000262053 FAXCQ5TGI0 409 aa2.54□□□□□ -2
ATF1-201ENST00000262053 B3GNTL1Q67FW5 361 aaPredicted RBP2.54□□□□□ -2
ATF1-201ENST00000262053 RAP1GAP2Q684P5 730 aa2.54□□□□□ -2
ATF1-201ENST00000262053 CRTC1Q6UUV9 634 aa2.54□□□□□ -2
ATF1-201ENST00000262053 SLC30A10Q6XR72 485 aa2.54□□□□□ -2
ATF1-201ENST00000262053 MOGAT3Q86VF5 341 aa2.54□□□□□ -2
ATF1-201ENST00000262053 LRRTM4Q86VH4 590 aa2.54□□□□□ -2
ATF1-201ENST00000262053 HERC6Q8IVU3 1022 aa2.54□□□□□ -2
ATF1-201ENST00000262053 MAPKAPK5Q8IW41 473 aa2.54□□□□□ -2
ATF1-201ENST00000262053 SUGP1Q8IWZ8 645 aaKnown RBP2.54□□□□□ -2
ATF1-201ENST00000262053 NME8Q8N427 588 aa2.54□□□□□ -2
ATF1-201ENST00000262053 SIMC1Q8NDZ2 872 aa2.54□□□□□ -2
ATF1-201ENST00000262053 ZNF503Q96F45 646 aa2.54□□□□□ -2
ATF1-201ENST00000262053 ADAM2Q99965 735 aa2.54□□□□□ -2
ATF1-201ENST00000262053 TRIM5Q9C035 493 aa2.54□□□□□ -2
ATF1-201ENST00000262053 TWSG1Q9GZX9 223 aa2.54□□□□□ -2
ATF1-201ENST00000262053 MMRN2Q9H8L6 949 aa2.54□□□□□ -2
ATF1-201ENST00000262053 WASH6PQ9NQA3 447 aa2.54□□□□□ -2
ATF1-201ENST00000262053 RASSF1Q9NS23 344 aa2.54□□□□□ -2
ATF1-201ENST00000262053 TBC1D23Q9NUY8 699 aa2.54□□□□□ -2
ATF1-201ENST00000262053 ANKFY1Q9P2R3 1169 aa2.54□□□□□ -2
ATF1-201ENST00000262053 ZMYND8Q9ULU4 1186 aaPredicted RBP2.54□□□□□ -2
ATF1-201ENST00000262053 ATP11BQ9Y2G3 1177 aa2.54□□□□□ -2
ATF1-201ENST00000262053 TBC1D30Q9Y2I9 924 aa2.54□□□□□ -2
ATF1-201ENST00000262053 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.54□□□□□ -2
ATF1-201ENST00000262053 TESMINQ9Y4I5 508 aa2.54□□□□□ -2
ATF1-201ENST00000262053 SCINQ9Y6U3 715 aa2.54□□□□□ -2
ATF1-201ENST00000262053 AQRO60306 1485 aaKnown RBP eCLIP2.54□□□□□ -2
ATF1-201ENST00000262053 CUX1P39880 1505 aa2.54□□□□□ -2
ATF1-201ENST00000262053 SETBP1Q9Y6X0 1596 aa2.54□□□□□ -2
ATF1-201ENST00000262053 KIAA0556O60303 1618 aa2.54□□□□□ -2
ATF1-201ENST00000262053 ADCY10Q96PN6 1610 aa2.54□□□□□ -2
ATF1-201ENST00000262053 CPS1P31327 1500 aa2.54□□□□□ -2
ATF1-201ENST00000262053 SPATA31A3Q5VYP0 1347 aa2.54□□□□□ -2
ATF1-201ENST00000262053 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.54□□□□□ -2
ATF1-201ENST00000262053 A0A1B0GTW7 788 aa2.54□□□□□ -2
ATF1-201ENST00000262053 RRN3P2A6NIE6 340 aa2.54□□□□□ -2
ATF1-201ENST00000262053 DIRC3C9JPN6 131 aa2.54□□□□□ -2
ATF1-201ENST00000262053 EYA2O00167 538 aa2.54□□□□□ -2
ATF1-201ENST00000262053 RAB27BO00194 218 aa2.54□□□□□ -2
ATF1-201ENST00000262053 POLRMTO00411 1230 aaKnown RBP2.54□□□□□ -2
ATF1-201ENST00000262053 PCDH17O14917 1159 aa2.54□□□□□ -2
ATF1-201ENST00000262053 PIP5K1BO14986 540 aa2.54□□□□□ -2
ATF1-201ENST00000262053 CYP27B1O15528 508 aa2.54□□□□□ -2
ATF1-201ENST00000262053 HOXC11O43248 304 aaPredicted RBP2.54□□□□□ -2
ATF1-201ENST00000262053 EPB41L2O43491 1005 aaKnown RBP2.54□□□□□ -2
ATF1-201ENST00000262053 ASNA1O43681 348 aa2.54□□□□□ -2
ATF1-201ENST00000262053 TNFRSF6BO95407 300 aa2.54□□□□□ -2
ATF1-201ENST00000262053 FGFR4P22455 802 aa2.54□□□□□ -2
ATF1-201ENST00000262053 PPIFP30405 207 aaKnown RBP2.54□□□□□ -2
ATF1-201ENST00000262053 ADD2P35612 726 aa2.54□□□□□ -2
ATF1-201ENST00000262053 RXRGP48443 463 aa2.54□□□□□ -2
ATF1-201ENST00000262053 PTDSS1P48651 473 aaKnown RBP2.54□□□□□ -2
ATF1-201ENST00000262053 SATB1Q01826 763 aa2.54□□□□□ -2
ATF1-201ENST00000262053 BOP1Q14137 746 aaKnown RBP2.54□□□□□ -2
ATF1-201ENST00000262053 FAM110CQ1W6H9 321 aa2.54□□□□□ -2
ATF1-201ENST00000262053 ARHGAP15Q53QZ3 475 aa2.54□□□□□ -2
ATF1-201ENST00000262053 MANEALQ5VSG8 457 aa2.54□□□□□ -2
ATF1-201ENST00000262053 USP49Q70CQ1 688 aa2.54□□□□□ -2
ATF1-201ENST00000262053 TMTC1Q8IUR5 882 aa2.54□□□□□ -2
ATF1-201ENST00000262053 VRK3Q8IV63 474 aa2.54□□□□□ -2
ATF1-201ENST00000262053 ZNF483Q8TF39 744 aaPredicted RBP2.54□□□□□ -2
ATF1-201ENST00000262053 SLC25A43Q8WUT9 341 aaPredicted RBP2.54□□□□□ -2
ATF1-201ENST00000262053 RAPGEF4Q8WZA2 1011 aa2.54□□□□□ -2
ATF1-201ENST00000262053 NACC2Q96BF6 587 aa2.54□□□□□ -2
ATF1-201ENST00000262053 SLC46A1Q96NT5 459 aa2.54□□□□□ -2
ATF1-201ENST00000262053 TRIB1Q96RU8 372 aa2.54□□□□□ -2
ATF1-201ENST00000262053 PNKPQ96T60 521 aa2.54□□□□□ -2
ATF1-201ENST00000262053 SMOQ99835 787 aa2.54□□□□□ -2
ATF1-201ENST00000262053 PYM1Q9BRP8 204 aaKnown RBP2.54□□□□□ -2
ATF1-201ENST00000262053 SLC46A2Q9BY10 475 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms