RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 BCORL1Q5H9F3 1711 aa7.4□□□□□ -1.22
HERC2-201ENST00000261609 USP17L10C9JJH3 530 aa7.4□□□□□ -1.22
HERC2-201ENST00000261609 HK2P52789 917 aa7.4□□□□□ -1.22
HERC2-201ENST00000261609 CSE1LP55060 971 aaKnown RBP7.4□□□□□ -1.22
HERC2-201ENST00000261609 SNRNP35Q16560 246 aaKnown RBP7.4□□□□□ -1.22
HERC2-201ENST00000261609 CAMK1DQ8IU85 385 aa7.4□□□□□ -1.22
HERC2-201ENST00000261609 GALNT15Q8N3T1 639 aa7.4□□□□□ -1.22
HERC2-201ENST00000261609 SFRP1Q8N474 314 aa7.4□□□□□ -1.22
HERC2-201ENST00000261609 CKAP2Q8WWK9 683 aa7.4□□□□□ -1.22
HERC2-201ENST00000261609 C9orf16Q9BUW7 83 aa7.4□□□□□ -1.22
HERC2-201ENST00000261609 PLAGL2Q9UPG8 496 aa7.4□□□□□ -1.22
HERC2-201ENST00000261609 DDX3XO00571 662 aaKnown RBP eCLIP7.4□□□□□ -1.23
HERC2-201ENST00000261609 NPEPPSP55786 919 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 LRRC74AQ0VAA2 488 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 COX10Q12887 443 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 RALGDSQ12967 914 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 TBCELQ5QJ74 424 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 UNC45BQ8IWX7 931 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 MMTAG2Q9BU76 263 aaKnown RBP7.4□□□□□ -1.23
HERC2-201ENST00000261609 RSAD1Q9HA92 442 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 UBA2Q9UBT2 640 aaPredicted RBP7.4□□□□□ -1.23
HERC2-201ENST00000261609 SLC24A2Q9UI40 661 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 TUBA4AP68366 448 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 LLGL2Q6P1M3 1020 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 SRBD1Q8N5C6 995 aaKnown RBP7.4□□□□□ -1.23
HERC2-201ENST00000261609 RNFT2Q96EX2 444 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 KLHL32Q96NJ5 620 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 LMCD1Q9NZU5 365 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 CHORDC1Q9UHD1 332 aaPredicted RBP7.4□□□□□ -1.23
HERC2-201ENST00000261609 MAP3K13O43283 966 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 ABATP80404 500 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 AKIRIN2Q53H80 203 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 BTN2A2Q8WVV5 523 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 ATG4AQ8WYN0 398 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 RUVBL2Q9Y230 463 aaKnown RBP7.4□□□□□ -1.23
HERC2-201ENST00000261609 PCDHB2Q9Y5E7 798 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 RRM2P31350 389 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 PSEN1P49768 467 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 SLC15A2Q16348 729 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 PIF1Q9H611 641 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 ABCB11O95342 1321 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 SDR42E2A6NKP2 422 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 MATN2O00339 956 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 CAMTA2O94983 1202 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 TDP2O95551 362 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 GPR107Q5VW38 600 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 TCP10LQ8TDR4 215 aa7.4□□□□□ -1.23
HERC2-201ENST00000261609 CCDC189A1A4V9 331 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 ALOX5P09917 674 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 FOSL2P15408 326 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 ATF4P18848 351 aaPredicted RBP7.39□□□□□ -1.23
HERC2-201ENST00000261609 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.39□□□□□ -1.23
HERC2-201ENST00000261609 NRF1Q16656 503 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 FAM98BQ52LJ0 330 aaKnown RBP7.39□□□□□ -1.23
HERC2-201ENST00000261609 CLK4Q9HAZ1 481 aaKnown RBP7.39□□□□□ -1.23
HERC2-201ENST00000261609 CCDC182A6NF36 153 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 WARSP23381 471 aaKnown RBP7.39□□□□□ -1.23
HERC2-201ENST00000261609 TBX2Q13207 712 aaPredicted RBP7.39□□□□□ -1.23
HERC2-201ENST00000261609 KIAA1841Q6NSI8 718 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 TPRKBQ9Y3C4 175 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 SLCO1B7G3V0H7 640 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 TSPAN4O14817 238 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 PRLP01236 227 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 CCDC166P0CW27 439 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 NCF4Q15080 339 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 RIPOR1Q6ZS17 1223 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 SVOPQ8N4V2 548 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 CNPY3Q9BT09 278 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 HEG1Q9ULI3 1381 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 TRIM64CA6NLI5 447 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 EIF3DO15371 548 aaKnown RBP eCLIP7.39□□□□□ -1.232e-6■■□□□ 13.9
HERC2-201ENST00000261609 NDUFS3O75489 264 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 ADORA2BP29275 332 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 ANKS3Q6ZW76 656 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 SLC12A4Q9UP95 1085 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 INPP4BO15327 924 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 TUFMP49411 452 aaKnown RBP7.39□□□□□ -1.23
HERC2-201ENST00000261609 ZNF341Q9BYN7 854 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 WDR12Q9GZL7 423 aaKnown RBP7.39□□□□□ -1.23
HERC2-201ENST00000261609 GIN1Q9NXP7 522 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 DMTF1Q9Y222 760 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 HEATR9A2RTY3 570 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 TK2O00142 265 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 SEC24AO95486 1093 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 CPA3P15088 417 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 CNPY1Q3B7I2 92 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 RUNDC3AQ59EK9 446 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 TTC7BQ86TV6 843 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 EIF1ADQ8N9N8 165 aaKnown RBP7.39□□□□□ -1.23
HERC2-201ENST00000261609 TADA1Q96BN2 335 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 TLR10Q9BXR5 811 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 AVENQ9NQS1 362 aaPredicted RBP7.39□□□□□ -1.23
HERC2-201ENST00000261609 LOC100506127A0A0U1RQW1 187 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 IL12AP29459 219 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 STIP1P31948 543 aaKnown RBP7.39□□□□□ -1.23
HERC2-201ENST00000261609 TAF5Q15542 800 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 MZT2BQ6NZ67 158 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 ZNF677Q86XU0 584 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 SH3KBP1Q96B97 665 aa7.39□□□□□ -1.23
HERC2-201ENST00000261609 TINF2Q9BSI4 451 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms