RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 DYDC1Q8WWB3 177 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 NOX5Q96PH1 765 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 FAM192AQ9GZU8 254 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 IQCGQ9H095 443 aaKnown RBP19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 NOCTQ9UK39 431 aaKnown RBP19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 SNX9Q9Y5X1 595 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 A0A087X0T9 212 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 PJA2O43164 708 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 UPP2O95045 317 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 FAM228BP0C875 321 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 CYP11B1P15538 503 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 CALB2P22676 271 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 ANXA13P27216 316 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 TAF6P49848 677 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 PDE6CP51160 858 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 CDH8P55286 799 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 SH3BGRP55822 239 aaPredicted RBP19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 YWHAEP62258 255 aaKnown RBP19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 IRGCQ6NXR0 463 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 NOP9Q86U38 636 aaKnown RBP19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 VPS36Q86VN1 386 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 ELAC2Q9BQ52 826 aaKnown RBP19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 PCDHB7Q9Y5E2 793 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 MYH10P35580 1976 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 SART1O43290 800 aaKnown RBP19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 TUBP50607 506 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 CLCNKBP51801 687 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 ZNF132P52740 706 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 KRT71Q3SY84 523 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 SPDYCQ5MJ68 293 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 ARHGAP18Q8N392 663 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 CYP3A43Q9HB55 503 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 CTTNBP2NLQ9P2B4 639 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 SCOCQ9UIL1 159 aa19.81■□□□□ 0.76
COL4A3BP-201ENST00000261415 CASTOR2A6NHX0 329 aa19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 SPTLC1O15269 473 aa19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 SKIV2L2P42285 1042 aaKnown RBP19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 SV2CQ496J9 727 aa19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 HOOK3Q86VS8 718 aa19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 GLYCTKQ8IVS8 523 aa19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 LNX1Q8TBB1 728 aaPredicted RBP19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 UBLCP1Q8WVY7 318 aaPredicted RBP19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 IFT43Q96FT9 208 aa19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 MS4A14Q96JA4 679 aa19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 AGPAT1Q99943 283 aa19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 RNPEPL1Q9HAU8 725 aa19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 ABCF3Q9NUQ8 709 aa19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 STK38LQ9Y2H1 464 aa19.8■□□□□ 0.76
COL4A3BP-201ENST00000261415 KPNA7A9QM74 516 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 CALCAP01258 141 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 CSF2RAP15509 400 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 DESP17661 470 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 SCNN1BP51168 640 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 LILRA4P59901 499 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 TUSC3Q13454 348 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 IKBKEQ14164 716 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 NOMO2Q5JPE7 1267 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 MFSD5Q6N075 450 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 ASRGL1Q7L266 308 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 CRIPAKQ8N1N5 446 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 URGCPQ8TCY9 931 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 PAAF1Q9BRP4 392 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 TRIM7Q9C029 511 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 DLGAP2Q9P1A6 1054 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 LRFN2Q9ULH4 789 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 DDX3XO00571 662 aaKnown RBP eCLIP19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 PODXLO00592 558 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 RAD51CO43502 376 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 PDHA1P08559 390 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 RPL9P32969 192 aaKnown RBP19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 PEX5P50542 639 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 BPIFB4P59827 614 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 ZNF394Q53GI3 561 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 SMYD5Q6GMV2 418 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 OR52E8Q6IFG1 317 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 LRRC34Q8IZ02 419 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 KCNV2Q8TDN2 545 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 DDX1Q92499 740 aaKnown RBP19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 GDAP2Q9NXN4 497 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 PCDH10Q9P2E7 1040 aa19.79■□□□□ 0.76
COL4A3BP-201ENST00000261415 NCK2O43639 380 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 MYBL1P10243 752 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 CHN1P15882 459 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 ECHS1P30084 290 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 UPP1Q16831 310 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 TMEM199Q8N511 208 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 SLC30A5Q8TAD4 765 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 NDNQ99608 321 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 FAM124BQ9H5Z6 455 aaPredicted RBP19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 NAGPAQ9UK23 515 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 EIF4E1BA6NMX2 242 aaKnown RBP19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 A8MUI8 341 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 CHRNB2P17787 502 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 TNFAIP3P21580 790 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 IGFBP6P24592 240 aaPredicted RBP19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 GNA15P30679 374 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 CDR2Q01850 454 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 INCA1Q0VD86 236 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.78■□□□□ 0.764e-6■■■■□ 19.8
COL4A3BP-201ENST00000261415 ABI1Q8IZP0 508 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms