RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 TAGLN3Q9UI15 199 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 ZBTB12Q9Y330 459 aaPredicted RBP16.57■□□□□ 0.24
LMNB1-201ENST00000261366 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 AQP4P55087 323 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 ACTR3P61158 418 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 DPYSL3Q14195 570 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 PDCD2Q16342 344 aaPredicted RBP16.56■□□□□ 0.24
LMNB1-201ENST00000261366 SLC5A9Q2M3M2 681 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 RAB6CQ53S08 254 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 TCHHL1Q5QJ38 904 aaPredicted RBP16.56■□□□□ 0.24
LMNB1-201ENST00000261366 C16orf46Q6P387 395 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 SATL1Q86VE3 508 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.56■□□□□ 0.24
LMNB1-201ENST00000261366 SLC44A1Q8WWI5 657 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 TFAP2BQ92481 460 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 DNAJC1Q96KC8 554 aaKnown RBP16.56■□□□□ 0.24
LMNB1-201ENST00000261366 MSTO1Q9BUK6 570 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 RAB6CQ9H0N0 254 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 RAB6BQ9NRW1 208 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 FBXO40Q9UH90 709 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 MAD1L1Q9Y6D9 718 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 NRXN2Q9P2S2 1712 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 CAPN14A8MX76 684 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 H7C0C1 242 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 LRCH4O75427 683 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 PEX2P28328 305 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 ATP5OP48047 213 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 HSD17B4P51659 736 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 RAP1GDS1P52306 607 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 DLGAP5Q15398 846 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 POLNQ7Z5Q5 900 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 ARFGAP1Q8N6T3 406 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 CLEC4DQ8WXI8 215 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 VCPIP1Q96JH7 1222 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 TCHPQ9BT92 498 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 TMEM39BQ9GZU3 492 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 ETNK2Q9NVF9 386 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 ZNF536O15090 1300 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 FKBP1AP62942 108 aaKnown RBP16.56■□□□□ 0.24
LMNB1-201ENST00000261366 DLG1Q12959 904 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 PGM5Q15124 567 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 TRMT5Q32P41 509 aaKnown RBP16.56■□□□□ 0.24
LMNB1-201ENST00000261366 ARHGEF16Q5VV41 709 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 NET1Q7Z628 596 aaPredicted RBP16.56■□□□□ 0.24
LMNB1-201ENST00000261366 CHSY1Q86X52 802 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 ZNF341Q9BYN7 854 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 PPCSQ9HAB8 311 aa16.56■□□□□ 0.24
LMNB1-201ENST00000261366 A0A0B4J269 797 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 C3orf70A6NLC5 250 aaPredicted RBP16.55■□□□□ 0.24
LMNB1-201ENST00000261366 MCF2LO15068 1137 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 MAGEC1O60732 1142 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 TGDSO95455 350 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 KRT3P12035 628 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 GMPRP36959 345 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 TNFSF9P41273 254 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 GRIA2P42262 883 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 MYL6P60660 151 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 MRPS5P82675 430 aaKnown RBP16.55■□□□□ 0.24
LMNB1-201ENST00000261366 PSMD6Q15008 389 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 GRAMD1BQ3KR37 738 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 TBC1D25Q3MII6 688 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 MYLK4Q86YV6 388 aaPredicted RBP16.55■□□□□ 0.24
LMNB1-201ENST00000261366 CRLF3Q8IUI8 442 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 NDUFAF2Q8N183 169 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 WDTC1Q8N5D0 677 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 TTLL6Q8N841 843 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 OR6Y1Q8NGX8 325 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 TMEM174Q8WUU8 243 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 ZNF668Q96K58 619 aaPredicted RBP16.55■□□□□ 0.24
LMNB1-201ENST00000261366 CENPKQ9BS16 269 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 IMPG2Q9BZV3 1241 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 WWP1Q9H0M0 922 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 DMAP1Q9NPF5 467 aaPredicted RBP16.55■□□□□ 0.24
LMNB1-201ENST00000261366 CNTN3Q9P232 1028 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 SLC17A6Q9P2U8 582 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 NXF1Q9UBU9 619 aaKnown RBP16.55■□□□□ 0.24
LMNB1-201ENST00000261366 PLA2G4CQ9UP65 541 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 CALB1P05937 261 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 GARTP22102 1010 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 KDELR1P24390 212 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 CAP2P40123 477 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 CDK7P50613 346 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 OSTNP61366 133 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 HIC1Q14526 733 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 TRIP10Q15642 601 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 CDO1Q16878 200 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.55■□□□□ 0.24
LMNB1-201ENST00000261366 SH3PXD2AQ5TCZ1 1133 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 RNF111Q6ZNA4 994 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 ST13P4Q8IZP2 240 aaPredicted RBP16.55■□□□□ 0.24
LMNB1-201ENST00000261366 TMEM35BQ8NCS4 154 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 NR1H4Q96RI1 486 aaPredicted RBP16.55■□□□□ 0.24
LMNB1-201ENST00000261366 MTMR12Q9C0I1 747 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 PIH1D1Q9NWS0 290 aaKnown RBP16.55■□□□□ 0.24
LMNB1-201ENST00000261366 HEY1Q9Y5J3 304 aa16.55■□□□□ 0.24
LMNB1-201ENST00000261366 ICAM1P05362 532 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 APRTP07741 180 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 PIGHQ14442 188 aaPredicted RBP16.54■□□□□ 0.24
LMNB1-201ENST00000261366 GSTA3Q16772 222 aa16.54■□□□□ 0.24
LMNB1-201ENST00000261366 DENND1BQ6P3S1 775 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms