RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CPA4Q9UI42 421 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 HAO1Q9UJM8 370 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 SPATA31A5Q5VU36 1347 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 SPATA31A7Q8IWB4 1347 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 ENO4A6NNW6 628 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 RNF103O00237 685 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 SMNDC1O75940 238 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL8A1-201ENST00000261037 USP1O94782 785 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 ALFQ53S48 1182 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 CACHD1Q5VU97 1274 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 FAM131BQ86XD5 332 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 BBS7Q8IWZ6 715 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 ERGIC2Q96RQ1 377 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 CAAP1Q9H8G2 361 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 PPCSQ9HAB8 311 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 PXMP2Q9NR77 195 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 GTF2A1LQ9UNN4 478 aa12.51□□□□□ -0.41
COL8A1-201ENST00000261037 CNTNAP2Q9UHC6 1331 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 SLC12A8A0AV02 714 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 GRIN3BO60391 1043 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 WBP4O75554 376 aaKnown RBP12.5□□□□□ -0.41
COL8A1-201ENST00000261037 ITGB6P18564 788 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 CYP51A1Q16850 503 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 LY6KQ17RY6 165 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 DENND1BQ6P3S1 775 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 PRPF18Q99633 342 aaKnown RBP12.5□□□□□ -0.41
COL8A1-201ENST00000261037 CGRRF1Q99675 332 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 HEY2Q9UBP5 337 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 VDRP11473 427 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 RPS12P25398 132 aaKnown RBP12.5□□□□□ -0.41
COL8A1-201ENST00000261037 NAMPTP43490 491 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 CLK1P49759 484 aaKnown RBP12.5□□□□□ -0.41
COL8A1-201ENST00000261037 AASDHQ4L235 1098 aaPredicted RBP12.5□□□□□ -0.41
COL8A1-201ENST00000261037 P3H2Q8IVL5 708 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 VPS37AQ8NEZ2 397 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 DDI1Q8WTU0 396 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 VMP1Q96GC9 406 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 TMEM169Q96HH4 297 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 NT5MQ9NPB1 228 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 ZSCAN32Q9NX65 697 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 GTF3C4Q9UKN8 822 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 NR5A2O00482 541 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 MTSS1O43312 755 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 VPS26AO75436 327 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 MYL6P60660 151 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 HERVK_113P62684 666 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 BOLA3Q53S33 107 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 ILKAPQ9H0C8 392 aaPredicted RBP12.5□□□□□ -0.41
COL8A1-201ENST00000261037 PTPRHQ9HD43 1115 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 PIH1D1Q9NWS0 290 aaKnown RBP12.5□□□□□ -0.41
COL8A1-201ENST00000261037 BLOC1S6Q9UL45 172 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 NFIBO00712 420 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 KLC1Q07866 573 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 TFDP3Q5H9I0 405 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 ZNF484Q5JVG2 852 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 C4orf22Q6V702 233 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 SLC30A10Q6XR72 485 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 ZNF786Q8N393 782 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 RDM1Q8NG50 284 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 ZNF333Q96JL9 665 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 SERPINB12Q96P63 405 aa12.5□□□□□ -0.41
COL8A1-201ENST00000261037 ZBTB22O15209 634 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 STRNO43815 780 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 GLRA3O75311 464 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 ALDH1A2O94788 518 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 RUNX1T1Q06455 604 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 MAPK7Q13164 816 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 XRRA1Q6P2D8 792 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 PTAR1Q7Z6K3 402 aaPredicted RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 STRA8Q7Z7C7 330 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 ATP8B4Q8TF62 1192 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 VPS28Q9UK41 221 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 AP4E1Q9UPM8 1137 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 NCOA3Q9Y6Q9 1424 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 M0R3G1 203 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CBX4O00257 560 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 SERPINI2O75830 405 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 RASSF9O75901 435 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 ALBP02768 609 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CXCL8P10145 99 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 TCF3P15923 654 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CCND1P24385 295 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 MRNIPQ6NTE8 343 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 SPOCD1Q6ZMY3 1216 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 ADGRA1Q86SQ6 560 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 AGBL3Q8NEM8 1001 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 OSBPL10Q9BXB5 764 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 FOXP3Q9BZS1 431 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 AGO4Q9HCK5 861 aaKnown RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 SNTG2Q9NY99 539 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 USP18Q9UMW8 372 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 CAPN6Q9Y6Q1 641 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 A0A087WZ62 844 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 TSPAN3O60637 253 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 POMCP01189 267 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 MLH1P40692 756 aa12.49□□□□□ -0.41
COL8A1-201ENST00000261037 RPS7P62081 194 aaKnown RBP12.49□□□□□ -0.41
COL8A1-201ENST00000261037 PRKCQQ04759 706 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms