RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ZBED1O96006 694 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 CSH1P0DML2 217 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 CSH2P0DML3 217 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 HOXA9P31269 272 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 GSCP56915 257 aaPredicted RBP16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 SNX16P57768 344 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 KRT83P78385 493 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 PM20D1Q6GTS8 502 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 OR6B2Q6IFH4 312 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 OLFML1Q6UWY5 402 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 TMEM184AQ6ZMB5 413 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 BHLHA9Q7RTU4 235 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 DNAJB7Q7Z6W7 309 aaPredicted RBP16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 ATRIPQ8WXE1 791 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 MYLIPQ8WY64 445 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 CASP10Q92851 521 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 ARHGEF26Q96DR7 871 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 MCRS1Q96EZ8 462 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 TTLL2Q9BWV7 592 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 ZDHHC7Q9NXF8 308 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 STRIP2Q9ULQ0 834 aa16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 MAGED2Q9UNF1 606 aaPredicted RBP16.62■□□□□ 0.25
CCDC90B-201ENST00000260054 RTN3O95197 1032 aaPredicted RBP16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 TMEM253P0C7T8 217 aa16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 VAV2P52735 878 aa16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 DAOAP59103 153 aa16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 MRPS5P82675 430 aaKnown RBP16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 ZNF268Q14587 947 aaPredicted RBP16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 SCML4Q8N228 414 aa16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 TRIM11Q96F44 468 aa16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 MYRFLQ96LU7 910 aa16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 CDX2Q99626 313 aaPredicted RBP16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 FBXO44Q9H4M3 255 aa16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 MYO1AQ9UBC5 1043 aa16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 CNOT8Q9UFF9 292 aaKnown RBP16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 INTUQ9ULD6 942 aa16.61■□□□□ 0.25
CCDC90B-201ENST00000260054 SPDYE4A6NLX3 237 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 GOLGA8SH3BPF8 625 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 FBXO21O94952 628 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 GJB6O95452 261 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 HNRNPA1P09651 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 CCDC175P0C221 793 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 MYBL1P10243 752 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 YWHAQP27348 245 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 PGFP49763 221 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 GPC5P78333 572 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 SLC6A3Q01959 620 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 ADAM15Q13444 863 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 TAF5Q15542 800 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 PLEKHA7Q6IQ23 1121 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 ELMSAN1Q6PJG2 1045 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 ITIH5Q86UX2 942 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 ZDHHC17Q8IUH5 632 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 MICALL1Q8N3F8 863 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 DEFB123Q8N688 67 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 C12orf76Q8N812 135 aaPredicted RBP16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 C3orf20Q8ND61 904 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 CTNNBL1Q8WYA6 563 aaPredicted RBP16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 ZNF707Q96C28 371 aaPredicted RBP16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 GUCD1Q96NT3 240 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 LACRTQ9GZZ8 138 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 ZNF334Q9HCZ1 680 aaPredicted RBP16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 LUC7LQ9NQ29 371 aaKnown RBP16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 COMMD8Q9NX08 183 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 WDR35Q9P2L0 1181 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 SCML2Q9UQR0 700 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 ASB3Q9Y575 518 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 EYSQ5T1H1 3165 aa16.6■□□□□ 0.25
CCDC90B-201ENST00000260054 CCDC195A0A1B0GUA6 201 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 YJEFN3A6XGL0 299 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 E7ENQ6 273 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 CYP1A2P05177 515 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 TAF10Q12962 218 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 MAMLD1Q13495 774 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 TAF12Q16514 161 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 HS1BP3Q53T59 392 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 FAM102AQ5T9C2 384 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 HFE2Q6ZVN8 426 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 KIAA1328Q86T90 577 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 KHSRPQ92945 711 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 FBXO32Q969P5 355 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 TRIM44Q96DX7 344 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 TRMT2BQ96GJ1 504 aaKnown RBP16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 ZNF512Q96ME7 567 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 LRRC3Q9BY71 257 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 PRKD2Q9BZL6 878 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 SFXN1Q9H9B4 322 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 AVENQ9NQS1 362 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 DZANK1Q9NVP4 752 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 HCFC1R1Q9NWW0 138 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 GMIPQ9P107 970 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 PPP2R2CQ9Y2T4 447 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 GRAP2O75791 330 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 PAPLNO95428 1278 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 CTC1Q2NKJ3 1217 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 PPP1R15BQ5SWA1 713 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 ANKRD54Q6NXT1 300 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 DNAJC24Q6P3W2 148 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 TMC5Q6UXY8 1006 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 SLC26A9Q7LBE3 791 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms