RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 HHLA1C9JL84 531 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 CLASP2O75122 1294 aaKnown RBP16.4■□□□□ 0.22
GYPC-201ENST00000259254 CYP1A2P05177 515 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 ARHGAP25P42331 645 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 GABRB2P47870 512 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 SLC5A3P53794 718 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 TFF2Q03403 129 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 ZNF268Q14587 947 aaPredicted RBP16.4■□□□□ 0.22
GYPC-201ENST00000259254 VEPH1Q14D04 833 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 TAF12Q16514 161 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 AAK1Q2M2I8 961 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 DCUN1D2Q6PH85 259 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 CCDC149Q6ZUS6 474 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 RBM23Q86U06 439 aaKnown RBP16.4■□□□□ 0.22
GYPC-201ENST00000259254 ZDHHC17Q8IUH5 632 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 RHOT2Q8IXI1 618 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 TCEAL8Q8IYN2 117 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 NUP93Q8N1F7 819 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 KREMEN2Q8NCW0 462 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 C3orf20Q8ND61 904 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 STKLD1Q8NE28 680 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 MRPL38Q96DV4 380 aaKnown RBP16.4■□□□□ 0.22
GYPC-201ENST00000259254 NUP85Q9BW27 656 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 MRPL47Q9HD33 250 aaKnown RBP16.4■□□□□ 0.22
GYPC-201ENST00000259254 HSFX1Q9UBD0 423 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 PAXBP1Q9Y5B6 917 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 DUSP10Q9Y6W6 482 aa16.4■□□□□ 0.22
GYPC-201ENST00000259254 VWA8A3KMH1 1905 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 PER2O15055 1255 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 PAPSS1O43252 624 aaPredicted RBP16.39■□□□□ 0.21
GYPC-201ENST00000259254 BUB1O43683 1085 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 GABBR2O75899 941 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 FBXO21O94952 628 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 GJB6O95452 261 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 RPL34P49207 117 aaKnown RBP16.39■□□□□ 0.21
GYPC-201ENST00000259254 TWF1Q12792 350 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 PLD1Q13393 1074 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 RAB41Q5JT25 222 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 DENND5BQ6ZUT9 1274 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 SLC7A14Q8TBB6 771 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 SLC35G2Q8TBE7 412 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 CLEC4CQ8WTT0 213 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 MCRS1Q96EZ8 462 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 SPATA17Q96L03 361 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 TLE6Q9H808 572 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 METTL5Q9NRN9 209 aaKnown RBP16.39■□□□□ 0.21
GYPC-201ENST00000259254 UVRAGQ9P2Y5 699 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 FBXW11Q9UKB1 542 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 INSL5Q9Y5Q6 135 aa16.39■□□□□ 0.21
GYPC-201ENST00000259254 A0A0A6YYK5 440 aaPredicted RBP16.38■□□□□ 0.21
GYPC-201ENST00000259254 SLC38A8A6NNN8 435 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 BTNL10A8MVZ5 291 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 SART1O43290 800 aaKnown RBP16.38■□□□□ 0.21
GYPC-201ENST00000259254 RTN3O95197 1032 aaPredicted RBP16.38■□□□□ 0.21
GYPC-201ENST00000259254 MOCS3O95396 460 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 ZBED1O96006 694 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 ABL1P00519 1130 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 LRG1P02750 347 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 C8AP07357 584 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 USP17L7P0C7H9 530 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 KRT3P12035 628 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 ATF6P18850 670 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 CLCN4P51793 760 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 EPHB3P54753 998 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 RNASE9P60153 205 aaKnown RBP16.38■□□□□ 0.21
GYPC-201ENST00000259254 SLC6A3Q01959 620 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 MAMLD1Q13495 774 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 IFI16Q16666 785 aaKnown RBP16.38■□□□□ 0.21
GYPC-201ENST00000259254 PLEKHA7Q6IQ23 1121 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 LILRA6Q6PI73 481 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 OLFML1Q6UWY5 402 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 ZNF662Q6ZS27 426 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 ADGRD2Q7Z7M1 963 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 SCAMP5Q8TAC9 235 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 ZNF564Q8TBZ8 553 aaPredicted RBP16.38■□□□□ 0.21
GYPC-201ENST00000259254 ADAMTS19Q8TE59 1207 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 NDRG1Q92597 394 aaKnown RBP16.38■□□□□ 0.21
GYPC-201ENST00000259254 GOLGA1Q92805 767 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 HLA-CQ95604 372 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 PPP2R3CQ969Q6 453 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 FAM149B1Q96BN6 582 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 MCEEQ96PE7 176 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 OSGEPQ9NPF4 335 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 CNGB3Q9NQW8 809 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 KCND1Q9NSA2 647 aa16.38■□□□□ 0.21
GYPC-201ENST00000259254 MAGED2Q9UNF1 606 aaPredicted RBP16.38■□□□□ 0.21
GYPC-201ENST00000259254 TMEM110-MUSTN1A8MSY1 372 aa16.37■□□□□ 0.21
GYPC-201ENST00000259254 TNFRSF10BO14763 440 aa16.37■□□□□ 0.21
GYPC-201ENST00000259254 KIF5CO60282 957 aa16.37■□□□□ 0.21
GYPC-201ENST00000259254 GRAP2O75791 330 aa16.37■□□□□ 0.21
GYPC-201ENST00000259254 EPCAMP16422 314 aa16.37■□□□□ 0.21
GYPC-201ENST00000259254 YWHAQP27348 245 aa16.37■□□□□ 0.21
GYPC-201ENST00000259254 NRIP1P48552 1158 aa16.37■□□□□ 0.21
GYPC-201ENST00000259254 KCNQ1P51787 676 aa16.37■□□□□ 0.21
GYPC-201ENST00000259254 GSCP56915 257 aaPredicted RBP16.37■□□□□ 0.21
GYPC-201ENST00000259254 DAOAP59103 153 aa16.37■□□□□ 0.21
GYPC-201ENST00000259254 MTMR3Q13615 1198 aa16.37■□□□□ 0.21
GYPC-201ENST00000259254 EFHC1Q5JVL4 640 aa16.37■□□□□ 0.21
GYPC-201ENST00000259254 PPM1LQ5SGD2 360 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms