RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 TRIM31Q9BZY9 425 aa19.8■□□□□ 0.76
TRIM47-201ENST00000254816 ELAC1Q9H777 363 aaKnown RBP19.8■□□□□ 0.76
TRIM47-201ENST00000254816 CALCOCO1Q9P1Z2 691 aa19.8■□□□□ 0.76
TRIM47-201ENST00000254816 KANSL3Q9P2N6 904 aa19.8■□□□□ 0.76
TRIM47-201ENST00000254816 USP18Q9UMW8 372 aa19.8■□□□□ 0.76
TRIM47-201ENST00000254816 ACTN2P35609 894 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 COILP38432 576 aaPredicted RBP19.79■□□□□ 0.76
TRIM47-201ENST00000254816 PTGIRP43119 386 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 ACADSBP45954 432 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 HADHQ16836 314 aaKnown RBP19.79■□□□□ 0.76
TRIM47-201ENST00000254816 SPOCD1Q6ZMY3 1216 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 LRRTM3Q86VH5 581 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 HSPH1Q92598 858 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 APBB2Q92870 758 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 ACBD6Q9BR61 282 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 DPH5Q9H2P9 285 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 DDX56Q9NY93 547 aaKnown RBP19.79■□□□□ 0.76
TRIM47-201ENST00000254816 TRUB2O95900 331 aaKnown RBP19.79■□□□□ 0.76
TRIM47-201ENST00000254816 CD48P09326 243 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 INTS6LQ5JSJ4 861 aaKnown RBP19.79■□□□□ 0.76
TRIM47-201ENST00000254816 FBXO46Q6PJ61 603 aaPredicted RBP19.79■□□□□ 0.76
TRIM47-201ENST00000254816 POLNQ7Z5Q5 900 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 DNAJC5GQ8N7S2 189 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 ZMIZ2Q8NF64 920 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 NRDE2Q9H7Z3 1164 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 NGRNQ9NPE2 291 aaKnown RBP19.79■□□□□ 0.76
TRIM47-201ENST00000254816 CYLDQ9NQC7 956 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 DSEQ9UL01 958 aa19.79■□□□□ 0.76
TRIM47-201ENST00000254816 GOLGA6CA6NDK9 693 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 GOLGA6DP0CG33 693 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 COL6A1P12109 1028 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 SDC4P31431 198 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 ADCY1Q08828 1119 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 ACAP1Q15027 740 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 PPP2R5EQ16537 467 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 SLC26A9Q7LBE3 791 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 GPRIN1Q7Z2K8 1008 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 JAMLQ86YT9 394 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 CCDC105Q8IYK2 499 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 FAM172AQ8WUF8 416 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 ADAM33Q9BZ11 813 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 LRRC4Q9HBW1 653 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 GOLGA6AQ9NYA3 693 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 C3orf70A6NLC5 250 aaPredicted RBP19.78■□□□□ 0.76
TRIM47-201ENST00000254816 DAPK3O43293 454 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 HSF2BPO75031 334 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 CXCL10P02778 98 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 KRT7P08729 469 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 SCYL2Q6P3W7 929 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 FAM171BQ6P995 826 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 LEKR1Q6ZMV7 388 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 TOX2Q96NM4 488 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 ZIM3Q96PE6 472 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 LRRC19Q9H756 370 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 PCYOX1Q9UHG3 505 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 PCDHB8Q9UN66 801 aa19.78■□□□□ 0.76
TRIM47-201ENST00000254816 BHMG1C9JSJ3 638 aaPredicted RBP19.77■□□□□ 0.76
TRIM47-201ENST00000254816 DPYSL4O14531 572 aa19.77■□□□□ 0.76
TRIM47-201ENST00000254816 OR4Q2P0C623 313 aa19.77■□□□□ 0.76
TRIM47-201ENST00000254816 HSPA8P11142 646 aaKnown RBP19.77■□□□□ 0.76
TRIM47-201ENST00000254816 BDNFP23560 247 aa19.77■□□□□ 0.76
TRIM47-201ENST00000254816 CDKN2BP42772 138 aa19.77■□□□□ 0.76
TRIM47-201ENST00000254816 TKTL1P51854 596 aa19.77■□□□□ 0.76
TRIM47-201ENST00000254816 ATXN1P54253 815 aaKnown RBP19.77■□□□□ 0.76
TRIM47-201ENST00000254816 C1QTNF8P60827 252 aa19.77■□□□□ 0.76
TRIM47-201ENST00000254816 YWHAHQ04917 246 aaPredicted RBP19.77■□□□□ 0.76
TRIM47-201ENST00000254816 DHX34Q14147 1143 aaKnown RBP19.77■□□□□ 0.76
TRIM47-201ENST00000254816 CYP4V2Q6ZWL3 525 aaPredicted RBP19.77■□□□□ 0.76
TRIM47-201ENST00000254816 THEM5Q8N1Q8 247 aa19.77■□□□□ 0.76
TRIM47-201ENST00000254816 C12orf50Q8NA57 414 aaPredicted RBP19.77■□□□□ 0.76
TRIM47-201ENST00000254816 FAM149B1Q96BN6 582 aa19.77■□□□□ 0.76
TRIM47-201ENST00000254816 PKMYT1Q99640 499 aa19.77■□□□□ 0.76
TRIM47-201ENST00000254816 DCLK3Q9C098 648 aa19.77■□□□□ 0.76
TRIM47-201ENST00000254816 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.77■□□□□ 0.76
TRIM47-201ENST00000254816 UTP11Q9Y3A2 253 aaKnown RBP19.77■□□□□ 0.76
TRIM47-201ENST00000254816 hCG_1818297A0A087WSY0 165 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 NRP1O14786 923 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 TADA2AO75478 443 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 UPP2O95045 317 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 KDELR1P24390 212 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 PBX3P40426 434 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 CETN2P41208 172 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 NNTQ13423 1086 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.77■□□□□ 0.75
TRIM47-201ENST00000254816 CRIPAKQ8N1N5 446 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 FAM76AQ8TAV0 307 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 MAIP1Q8WWC4 291 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 KCTD13Q8WZ19 329 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 ARL8AQ96BM9 186 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 PAWRQ96IZ0 340 aaKnown RBP19.77■□□□□ 0.75
TRIM47-201ENST00000254816 RUFY1Q96T51 708 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 SH3GL2Q99962 352 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 NEUROG2Q9H2A3 272 aa19.77■□□□□ 0.75
TRIM47-201ENST00000254816 TYMPP19971 482 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 PCK1P35558 622 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 MRPS5P82675 430 aaKnown RBP19.76■□□□□ 0.75
TRIM47-201ENST00000254816 HLTFQ14527 1009 aaKnown RBP eCLIP19.76■□□□□ 0.75
TRIM47-201ENST00000254816 TFDP3Q5H9I0 405 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 SIX6OS1Q8N1H7 587 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 HAUS1Q96CS2 278 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms