RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 AKAP5P24588 427 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 CDH6P55285 790 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 EIF3EP60228 445 aaKnown RBP19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 FNBP1LQ5T0N5 605 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 SNX27Q96L92 541 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 DPEP3Q9H4B8 488 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 KIF9Q9HAQ2 790 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 GPATCH2LQ9NWQ4 482 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 GOLGA6L7A0A1B0GV03 622 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 MBLAC1A4D2B0 266 aaPredicted RBP19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 RASA4BC9J798 803 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 DNM1LO00429 736 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 TREHO43280 583 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 RASA4O43374 803 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 STAU1O95793 577 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 DCAF4L1Q3SXM0 396 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 CCDC14Q49A88 953 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 SYCP2LQ5T4T6 812 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 CENPUQ71F23 418 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 PIGWQ7Z7B1 504 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 ZC3H18Q86VM9 953 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 SCUBE3Q8IX30 993 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 CCDC197Q8NCU1 140 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 SPATA18Q8TC71 538 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 MAML1Q92585 1016 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 WDR83Q9BRX9 315 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 CNPY3Q9BT09 278 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 KATNAL1Q9BW62 490 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 APOC4-APOC2K7ER74 178 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 ALOX15BO15296 676 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 SEPT4O43236 478 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 GABBR2O75899 941 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 TMEM63AO94886 807 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 FSBPO95073 299 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 APOC2P02655 101 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 SMYD5Q6GMV2 418 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 SLC27A1Q6PCB7 646 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 TTC13Q8NBP0 860 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 CD99L2Q8TCZ2 262 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 B3GNT5Q9BYG0 378 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 FGFR1OP2Q9NVK5 253 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 SCN1AP35498 2009 aa19.55■□□□□ 0.72
PDLIM4-201ENST00000253754 MYCNP04198 464 aaPredicted RBP19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 RBP3P10745 1247 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 RARBP10826 455 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 PCK1P35558 622 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 GJA9P57773 515 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 GPX6P59796 221 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 ADAM17P78536 824 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 DPYSL3Q14195 570 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 EFTUD2Q15029 972 aaKnown RBP eCLIP19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 HIF1AQ16665 826 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 ANKRD20A8PQ5CZ79 823 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 SCYL2Q6P3W7 929 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 OLFML1Q6UWY5 402 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 C7orf31Q8N865 590 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 TMEM40Q8WWA1 233 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 DNAJB3Q8WWF6 145 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 GCOM2Q9BZD3 368 aaPredicted RBP19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 KLK14Q9P0G3 267 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 CASP8AP2Q9UKL3 1982 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 CLUHO75153 1309 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 CITO14578 2027 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 SMIM35A0A1B0GVV1 85 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 SPAG7O75391 227 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 PRKAR2AP13861 404 aaKnown RBP19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 CCND3P30281 292 aaPredicted RBP19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 ACTN3Q08043 901 aaPredicted RBP19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 ZC3H12AQ5D1E8 599 aaKnown RBP19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 C1orf228Q6PIY5 440 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 CXCL17Q6UXB2 119 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 CEP128Q6ZU80 1094 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 NT5DC4Q86YG4 428 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 PPIL6Q8IXY8 311 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 NAT8LQ8N9F0 302 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 LRRN4Q8WUT4 740 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 TTC25Q96NG3 672 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 MIS12Q9H081 205 aa19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 NGRNQ9NPE2 291 aaKnown RBP19.54■□□□□ 0.72
PDLIM4-201ENST00000253754 RECQL4O94761 1208 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 MAP3K6O95382 1288 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 TFE3P19532 575 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 ACAP1Q15027 740 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 ZKSCAN8Q15776 578 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 PKN2Q16513 984 aaKnown RBP19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 PKDCCQ504Y2 493 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 CCT6BQ92526 530 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 KHSRPQ92945 711 aaKnown RBP eCLIP19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 SPC25Q9HBM1 224 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 SAMD15Q9P1V8 674 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 MCF2LO15068 1137 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 PRPSAP2O60256 369 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 SSTR1P30872 391 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 YARSP54577 528 aaKnown RBP19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 ZBTB6Q15916 424 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 SOWAHAQ2M3V2 549 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 OR6B3Q8NGW1 331 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 CLEC4CQ8WTT0 213 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 FAM172AQ8WUF8 416 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 MAK16Q9BXY0 300 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms