RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 SLC8A2Q9UPR5 921 aa11□□□□□ -0.65
VPS50-201ENST00000251739 FAM208BQ5VWN6 2430 aa11□□□□□ -0.65
VPS50-201ENST00000251739 CEP192Q8TEP8 1941 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 AKAP13Q12802 2813 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 ZFYVE26Q68DK2 2539 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 AXIN1O15169 862 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 CUTAO60888 179 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 NFATC1O95644 943 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 APBB3O95704 486 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 PDGFRBP09619 1106 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 DMC1Q14565 340 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 MDH1BQ5I0G3 518 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 UNC13DQ70J99 1090 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 RASSF3Q86WH2 238 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 SCUBE3Q8IX30 993 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 IQUBQ8NA54 791 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 XXYLT1Q8NBI6 393 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 PLEKHO2Q8TD55 490 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 USP33Q8TEY7 942 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 ZNF516Q92618 1163 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 EXOC4Q96A65 974 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 DHX58Q96C10 678 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 BACH2Q9BYV9 841 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 ELOVL4Q9GZR5 314 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 RNF38Q9H0F5 515 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 DPEP3Q9H4B8 488 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 VRTNQ9H8Y1 702 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 TRPM5Q9NZQ8 1165 aa10.99□□□□□ -0.65
VPS50-201ENST00000251739 ANTXRLA6NF34 631 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 PCNX2A6NKB5 2137 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 K7EQS6 105 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 LEFTY2O00292 366 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 CCDC192P0DO97 292 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 DLATP10515 647 aaKnown RBP10.98□□□□□ -0.65
VPS50-201ENST00000251739 PTPN1P18031 435 aaKnown RBP10.98□□□□□ -0.65
VPS50-201ENST00000251739 CASP1P29466 404 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 GRIK1P39086 918 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 MPLP40238 635 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 PPP3CCP48454 512 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 CYP2J2P51589 502 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 CLDN10P78369 228 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 AMPD3Q01432 767 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 CYP27A1Q02318 531 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 KCNC4Q03721 635 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 MESP2Q0VG99 397 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 CCDC6Q16204 474 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 WDR72Q3MJ13 1102 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 TMEM174Q8WUU8 243 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 DDX1Q92499 740 aaKnown RBP10.98□□□□□ -0.65
VPS50-201ENST00000251739 ZNF396Q96N95 335 aaPredicted RBP10.98□□□□□ -0.65
VPS50-201ENST00000251739 MMS19Q96T76 1030 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 DUSP9Q99956 384 aaKnown RBP10.98□□□□□ -0.65
VPS50-201ENST00000251739 B3GNT5Q9BYG0 378 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 ZNF518BQ9C0D4 1074 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 EHD2Q9NZN4 543 aa10.98□□□□□ -0.65
VPS50-201ENST00000251739 CGNQ9P2M7 1197 aaKnown RBP10.98□□□□□ -0.65
VPS50-201ENST00000251739 TFIP11Q9UBB9 837 aaKnown RBP10.98□□□□□ -0.65
VPS50-201ENST00000251739 R3HCC1Q9Y3T6 440 aaKnown RBP10.98□□□□□ -0.65
VPS50-201ENST00000251739 ASPMQ8IZT6 3477 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 PKD1L2Q7Z442 2459 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 PVALEFA0A1B0GWK0 134 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 FAM92AA1XBS5 289 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 BCLAF3A2AJT9 711 aaKnown RBP10.97□□□□□ -0.65
VPS50-201ENST00000251739 TNFRSF10BO14763 440 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 DCLK1O15075 740 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 CLIC2O15247 247 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 HNRNPLP14866 589 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS50-201ENST00000251739 TNNI1P19237 187 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 NDUFV2P19404 249 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 ANXA13P27216 316 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 ATICP31939 592 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 GNL1P36915 607 aaPredicted RBP10.97□□□□□ -0.65
VPS50-201ENST00000251739 MYL6P60660 151 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 GUCA2AQ02747 115 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 TAF10Q12962 218 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 NR1H3Q13133 447 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 AASDHQ4L235 1098 aaPredicted RBP10.97□□□□□ -0.65
VPS50-201ENST00000251739 STPG1Q5TH74 334 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 RESP18Q5W5W9 173 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 PMS2CLQ68D20 193 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 PAQR9Q6ZVX9 377 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 HS2ST1Q7LGA3 356 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 FILIP1Q7Z7B0 1213 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 NELFCDQ8IXH7 590 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 ADGRG2Q8IZP9 1017 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 PHTF2Q8N3S3 785 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 B3GALNT2Q8NCR0 500 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 CCDC26Q8TAB7 109 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 CCDC127Q96BQ5 260 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 CNOT6LQ96LI5 555 aaKnown RBP10.97□□□□□ -0.65
VPS50-201ENST00000251739 FNBP1Q96RU3 617 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 SNX25Q9H3E2 840 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 SMOC1Q9H4F8 434 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 SMYD3Q9H7B4 428 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 VPS45Q9NRW7 570 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 IL37Q9NZH6 218 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 MMP17Q9ULZ9 603 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 CPQQ9Y646 472 aa10.97□□□□□ -0.65
VPS50-201ENST00000251739 A0A0A0MRY4 1105 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 CLDN5O00501 218 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms