RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 DHRS4L1P0CG22 281 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 EPHB2P29323 1055 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 CPA2P48052 419 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 YWHAEP62258 255 aaKnown RBP10.56□□□□□ -0.72
COPB1-201ENST00000249923 SATB1Q01826 763 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 PTPN11Q06124 597 aaPredicted RBP10.56□□□□□ -0.72
COPB1-201ENST00000249923 RCN2Q14257 317 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 KBTBD12Q3ZCT8 623 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 TAF1BQ53T94 588 aaPredicted RBP10.56□□□□□ -0.72
COPB1-201ENST00000249923 CELF3Q5SZQ8 465 aaKnown RBP10.56□□□□□ -0.72
COPB1-201ENST00000249923 HHATQ5VTY9 493 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 PPP1R2P3Q6NXS1 205 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 CCDC62Q6P9F0 684 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 LRRC6Q86X45 466 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 FAM13CQ8NE31 585 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 KHSRPQ92945 711 aaKnown RBP eCLIP10.56□□□□□ -0.723e-7■■□□□ 13.2
COPB1-201ENST00000249923 GRAMD1AQ96CP6 724 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 CPB2Q96IY4 423 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 INO80BQ9C086 356 aaPredicted RBP10.56□□□□□ -0.72
COPB1-201ENST00000249923 KBTBD13C9JR72 458 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 TXNDC9O14530 226 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 IRF6O14896 467 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 PEX11AO75192 247 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 RBP3P10745 1247 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 CA9Q16790 459 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 BBS9Q3SYG4 887 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 RASIP1Q5U651 963 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 SPATA18Q8TC71 538 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 SMYD2Q9NRG4 433 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.56□□□□□ -0.72
COPB1-201ENST00000249923 DLGAP2Q9P1A6 1054 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 CNTN3Q9P232 1028 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 PPP1R1BQ9UD71 204 aaPredicted RBP10.56□□□□□ -0.72
COPB1-201ENST00000249923 GJD2Q9UKL4 321 aa10.56□□□□□ -0.72
COPB1-201ENST00000249923 UGT1A9O60656 530 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 NEK3P51956 506 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 EIF3EP60228 445 aaKnown RBP10.55□□□□□ -0.72
COPB1-201ENST00000249923 BASP1P80723 227 aaKnown RBP10.55□□□□□ -0.72
COPB1-201ENST00000249923 SLC10A6Q3KNW5 377 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 ZC3H12AQ5D1E8 599 aaKnown RBP10.55□□□□□ -0.72
COPB1-201ENST00000249923 FAM160B1Q5W0V3 765 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 MTDHQ86UE4 582 aaKnown RBP10.55□□□□□ -0.72
COPB1-201ENST00000249923 APOBEC3FQ8IUX4 373 aaKnown RBP10.55□□□□□ -0.72
COPB1-201ENST00000249923 PQLC3Q8N755 202 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 PLD5Q8N7P1 536 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 LRRC37BQ96QE4 947 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 LPIN3Q9BQK8 851 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 TBC1D10AQ9BXI6 508 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 CALN1Q9BXU9 219 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 UGT1A7Q9HAW7 530 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 UGT1A10Q9HAW8 530 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 UGT1A8Q9HAW9 530 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 SSU72Q9NP77 194 aaKnown RBP10.55□□□□□ -0.72
COPB1-201ENST00000249923 GPATCH2LQ9NWQ4 482 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 SLC5A4Q9NY91 659 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 GPRC5DQ9NZD1 345 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 FETUBQ9UGM5 382 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 STRIP2Q9ULQ0 834 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 C2CD4BA6NLJ0 364 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 C22orf31O95567 290 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 ARL4CP56559 192 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 MXD4Q14582 209 aaPredicted RBP10.55□□□□□ -0.72
COPB1-201ENST00000249923 CRYMQ14894 314 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 NOMO1Q15155 1222 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 FAXCQ5TGI0 409 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 RFWD3Q6PCD5 774 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 FAM183BPQ6ZVS7 135 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 ILDR2Q71H61 639 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 CLNKQ7Z7G1 428 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 RFX6Q8HWS3 928 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 ATP11CQ8NB49 1132 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 KCTD6Q8NC69 237 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 LRRC8CQ8TDW0 803 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 CLMNQ96JQ2 1002 aa10.55□□□□□ -0.72
COPB1-201ENST00000249923 HMX2A2RU54 273 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 M0QYV0 167 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 HCRTO43612 131 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 KRT7P08729 469 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 STAG3L1P0CL83 205 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 TGFB3P10600 412 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 GNAZP19086 355 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 FAAP100Q0VG06 881 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 EFCAB12Q6NXP0 572 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 MOB2Q70IA6 237 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 BZW1Q7L1Q6 419 aaKnown RBP10.54□□□□□ -0.72
COPB1-201ENST00000249923 DPH6Q7L8W6 267 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 NLRP9Q7RTR0 991 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 TTC7BQ86TV6 843 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 CAND1Q86VP6 1230 aaKnown RBP10.54□□□□□ -0.72
COPB1-201ENST00000249923 STMN2Q93045 179 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 TMEM176AQ96HP8 235 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 PHACTR1Q9C0D0 580 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 PDZD7Q9H5P4 517 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 FBXO6Q9NRD1 293 aaPredicted RBP10.54□□□□□ -0.72
COPB1-201ENST00000249923 SENP1Q9P0U3 644 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 TNFSF13BQ9Y275 285 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 TTLL3Q9Y4R7 772 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 NR2E3Q9Y5X4 410 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 DNAJC25-GNG10A0A024R161 153 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 CFAP69A5D8W1 941 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms