RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 ZNF184Q99676 751 aaPredicted RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 DDX56Q9NY93 547 aaKnown RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 XPO1O14980 1071 aaKnown RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 DYNC1LI2O43237 492 aaPredicted RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 PSTPIP1O43586 416 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 EDF1O60869 148 aaKnown RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 TBXAS1P24557 533 aaPredicted RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 GARSP41250 739 aaKnown RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 RPL7AP62424 266 aaKnown RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 TFDP2Q14188 446 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 PDK4Q16654 411 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 MFSD5Q6N075 450 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 DSTYKQ6XUX3 929 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 ALYREFQ86V81 257 aaKnown RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 OR6J1Q8NGC5 347 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 OXNAD1Q96HP4 312 aaPredicted RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 MECRQ9BV79 373 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 EBF2Q9HAK2 575 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 CPA4Q9UI42 421 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 ZNF214Q9UL59 606 aaPredicted RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 COL2A1P02458 1487 aaPredicted RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 MYL3P08590 195 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 SH3BGRP55822 239 aaPredicted RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 PRAMEP78395 509 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 CUL2Q13617 745 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 TFDP3Q5H9I0 405 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 IRGCQ6NXR0 463 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 ZCCHC9Q8N567 271 aaKnown RBP13.88□□□□□ -0.19
PEX1-201ENST00000248633 INPP5DQ92835 1189 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 C12orf42Q96LP6 360 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 AGAP3Q96P47 875 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 FOXP3Q9BZS1 431 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 TRPV6Q9H1D0 765 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 ARHGEF3Q9NR81 526 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 GPATCH2LQ9NWQ4 482 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 PCDHA2Q9Y5H9 948 aa13.88□□□□□ -0.19
PEX1-201ENST00000248633 CSDE1O75534 798 aaKnown RBP13.87□□□□□ -0.19
PEX1-201ENST00000248633 SEC24DO94855 1032 aaPredicted RBP13.87□□□□□ -0.19
PEX1-201ENST00000248633 GSTT1P30711 240 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 WDR4P57081 412 aaKnown RBP13.87□□□□□ -0.19
PEX1-201ENST00000248633 MPP2Q14168 576 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 MORF4L2Q15014 288 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 ZNF568Q3ZCX4 644 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 CCNJLQ8IV13 435 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 EXD1Q8NHP7 514 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 DHX35Q9H5Z1 703 aaKnown RBP13.87□□□□□ -0.19
PEX1-201ENST00000248633 BTBD7Q9P203 1132 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 ZNF112Q9UJU3 913 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 FSCN2O14926 492 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 PGM3O95394 542 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 NOL9Q5SY16 702 aaKnown RBP13.87□□□□□ -0.19
PEX1-201ENST00000248633 METTL7BQ6UX53 244 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 CCDC60Q8IWA6 550 aaPredicted RBP13.87□□□□□ -0.19
PEX1-201ENST00000248633 FAM71AQ8IYT1 594 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 MRPL4Q9BYD3 311 aaKnown RBP13.87□□□□□ -0.19
PEX1-201ENST00000248633 SUDS3Q9H7L9 328 aaPredicted RBP13.87□□□□□ -0.19
PEX1-201ENST00000248633 APPL1Q9UKG1 709 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 KBTBD13C9JR72 458 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 MED7O43513 233 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 PSEN1P49768 467 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 RPL10AP62906 217 aaKnown RBP13.87□□□□□ -0.19
PEX1-201ENST00000248633 PDCD2Q16342 344 aaPredicted RBP13.87□□□□□ -0.19
PEX1-201ENST00000248633 TMEM259Q4ZIN3 620 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 SLC45A4Q5BKX6 768 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 CLNKQ7Z7G1 428 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 TMA16Q96EY4 203 aaKnown RBP13.87□□□□□ -0.19
PEX1-201ENST00000248633 LRMDAQ9H2I8 198 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 SMNDC1O75940 238 aaKnown RBP eCLIP13.87□□□□□ -0.19
PEX1-201ENST00000248633 HOXD13P35453 343 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 PHKA2P46019 1235 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 UGCGQ16739 394 aa13.87□□□□□ -0.19
PEX1-201ENST00000248633 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.87□□□□□ -0.19
PEX1-201ENST00000248633 ZMPSTE24O75844 475 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 GSTA2P09210 222 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 P4HA1P13674 534 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 PDGFRAP16234 1089 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 UBA1P22314 1058 aaKnown RBP13.86□□□□□ -0.19
PEX1-201ENST00000248633 VCPP55072 806 aaKnown RBP13.86□□□□□ -0.19
PEX1-201ENST00000248633 KBTBD12Q3ZCT8 623 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 UBA3Q8TBC4 463 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 EPS15L1Q9UBC2 864 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 TLK1Q9UKI8 766 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 WASF2Q9Y6W5 498 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 TPBGLP0DKB5 382 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 TGFB3P10600 412 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 SLC25A3Q00325 362 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 CYP24A1Q07973 514 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 RPS6KA2Q15349 733 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 TTC7BQ86TV6 843 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 ZNF483Q8TF39 744 aaPredicted RBP13.86□□□□□ -0.19
PEX1-201ENST00000248633 SRPK1Q96SB4 655 aaKnown RBP13.86□□□□□ -0.19
PEX1-201ENST00000248633 SERPINI1Q99574 410 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 C2orf40Q9H1Z8 148 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 RPF1Q9H9Y2 349 aaKnown RBP13.86□□□□□ -0.19
PEX1-201ENST00000248633 C17orf75Q9HAS0 396 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 ASNSD1Q9NWL6 643 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 CLIC5Q9NZA1 410 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 DNAJC16Q9Y2G8 782 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 GOLGA8QA0A0J9YX86 632 aa13.86□□□□□ -0.19
PEX1-201ENST00000248633 GOLGA8OA6NCC3 632 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms