RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 NDUFV1P49821 464 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 SLC25A11Q02978 314 aaKnown RBP19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 FAM117BQ6P1L5 589 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 WDR93Q6P2C0 686 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 FBXO38Q6PIJ6 1188 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 ANKS3Q6ZW76 656 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 ARFGAP1Q8N6T3 406 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 KCTD6Q8NC69 237 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 ZMIZ2Q8NF64 920 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 FAM172AQ8WUF8 416 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 MAGOHBQ96A72 148 aaKnown RBP19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 RUNDC3BQ96NL0 473 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 TTPALQ9BTX7 342 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 OSBPL8Q9BZF1 889 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 ULBP1Q9BZM6 244 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 PNPLA8Q9NP80 782 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 IL23AQ9NPF7 189 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 KLHL11Q9NVR0 708 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 STIM2Q9P246 746 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 RAB21Q9UL25 225 aa19.6■□□□□ 0.73
TNFSF9-201ENST00000245817 CARNS1A5YM72 827 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 PI4K2BG5E9Z4 385 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 CAPN9O14815 690 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 PHF2O75151 1096 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 RALAP11233 206 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 H2AFXP16104 143 aaPredicted RBP19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 CHRNA3P32297 505 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 MATKP42679 507 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 RGS19P49795 217 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 CACNA2D1P54289 1103 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 WDR5P61964 334 aaKnown RBP19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 SLC7A5Q01650 507 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 ADCY1Q08828 1119 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 MRPL58Q14197 206 aaKnown RBP19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 LLGL1Q15334 1064 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 SMTNL2Q2TAL5 461 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 RAB41Q5JT25 222 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 TRNP1Q6NT89 227 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 FUBP3Q96I24 572 aaKnown RBP eCLIP19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 SLITRK1Q96PX8 696 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 DDX23Q9BUQ8 820 aaKnown RBP19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 HEMGNQ9BXL5 484 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 HOMER3Q9NSC5 361 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 ABI2Q9NYB9 513 aaPredicted RBP19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 STAP1Q9ULZ2 295 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 PCDHB5Q9Y5E4 795 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 CCDC151A5D8V7 595 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 DAB1O75553 588 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 TJP3O95049 919 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 ZBED1O96006 694 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 DEFB103AP81534 67 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 MRPS25P82663 173 aaKnown RBP19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 PPIGQ13427 754 aaKnown RBP eCLIP19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 BTG3Q14201 252 aaPredicted RBP19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 BOLA3Q53S33 107 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 TFDP3Q5H9I0 405 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 KCNT1Q5JUK3 1230 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 SH3PXD2AQ5TCZ1 1133 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 TXNRD3NBQ6F5E7 133 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 TMCO3Q6UWJ1 677 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 SPOCD1Q6ZMY3 1216 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 IFT20Q8IY31 132 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 DEFB106AQ8N104 65 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 HSPH1Q92598 858 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 CWH43Q9H720 699 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 POPDC2Q9HBU9 364 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 NR2E3Q9Y5X4 410 aa19.59■□□□□ 0.73
TNFSF9-201ENST00000245817 MICAL3Q7RTP6 2002 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 HHLA1C9JL84 531 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 RAD51CO43502 376 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 HEXIM1O94992 359 aaKnown RBP19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 USP17L7P0C7H9 530 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 RARAP10276 462 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 CPB1P15086 417 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 CYP2F1P24903 491 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 IL1R2P27930 398 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 NOS2P35228 1153 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 RABGGTBP53611 331 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 ARPP19P56211 112 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 DAOAP59103 153 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 VSNL1P62760 191 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 RBM10P98175 930 aaKnown RBP19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 SMARCB1Q12824 385 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 DCAF6Q58WW2 860 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 KAZNQ674X7 775 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 KIAA1841Q6NSI8 718 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 OTOP2Q7RTS6 562 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 SCN4BQ8IWT1 228 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 RAPGEF5Q92565 580 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 NDRG1Q92597 394 aaKnown RBP19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 ZNF689Q96CS4 500 aaPredicted RBP19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 B3GALT6Q96L58 329 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 ZNF558Q96NG5 402 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 TMEM30AQ9NV96 361 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 AMACRQ9UHK6 382 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 NR2E1Q9Y466 385 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 TSC2P49815 1807 aa19.58■□□□□ 0.72
TNFSF9-201ENST00000245817 ZBBXA8MT70 800 aa19.57■□□□□ 0.72
TNFSF9-201ENST00000245817 SULT1E1P49888 294 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms