RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 CNOT8Q9UFF9 292 aaKnown RBP17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 SF3B1O75533 1304 aaKnown RBP eCLIP17.81■□□□□ 0.449e-6■■■■■ 68.9
CDKN1A-201ENST00000244741 VWA8A3KMH1 1905 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 NDUFAB1O14561 156 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 TRAPPC3O43617 180 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 OR4Q2P0C623 313 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 WARSP23381 471 aaKnown RBP17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 YWHAHQ04917 246 aaPredicted RBP17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 SIX1Q15475 284 aaPredicted RBP17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 AGBL2Q5U5Z8 902 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 METTL23Q86XA0 190 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 FBXO25Q8TCJ0 367 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 ZNF606Q8WXB4 792 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 FAXDC2Q96IV6 333 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 EPB41L4BQ9H329 900 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 RASAL2Q9UJF2 1139 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 PCDHB8Q9UN66 801 aa17.81■□□□□ 0.44
CDKN1A-201ENST00000244741 GABRDO14764 452 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 CA3P07451 260 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 RARAP10276 462 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 CCDC130P13994 396 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 LAG3P18627 525 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 RPL21P46778 160 aaKnown RBP17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 CCDC137Q6PK04 289 aaKnown RBP17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 PRSS55Q6UWB4 352 aaPredicted RBP17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 SLC39A11Q8N1S5 342 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 OR10T2Q8NGX3 314 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 AUTS2Q8WXX7 1259 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 TMEM169Q96HH4 297 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 C17orf80Q9BSJ5 609 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 RASSF4Q9H2L5 321 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 DNAJB2P25686 324 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 SEC24CP53992 1094 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 CYP1B1Q16678 543 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 SPDYCQ5MJ68 293 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 VARS2Q5ST30 1063 aaKnown RBP17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 TMEM86AQ8N2M4 240 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 TSPYL1Q9H0U9 437 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 CERS4Q9HA82 394 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 SPG21Q9NZD8 308 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 NOVA2Q9UNW9 492 aaKnown RBP17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 MYO7AQ13402 2215 aa17.8■□□□□ 0.44
CDKN1A-201ENST00000244741 KIAA1671Q9BY89 1806 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 MYBPHLA2RUH7 354 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 LINC01553A4QN01 128 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 CLDN5O00501 218 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 UNGP13051 313 aaPredicted RBP17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 RPL17P18621 184 aaKnown RBP17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 COILP38432 576 aaPredicted RBP17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 ARPP19P56211 112 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 RWDD2BP57060 319 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 LLGL1Q15334 1064 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 KRT71Q3SY84 523 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 MDH1BQ5I0G3 518 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 PPP1R26Q5T8A7 1209 aaPredicted RBP17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 ARFGAP2Q8N6H7 521 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 KLHL23Q8NBE8 558 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 B3GALNT2Q8NCR0 500 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 TRIM7Q9C029 511 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 ALG13Q9NP73 1137 aaKnown RBP17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 CRTAC1Q9NQ79 661 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 SLC12A6Q9UHW9 1150 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 YBX2Q9Y2T7 364 aaKnown RBP17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 PCDHB12Q9Y5F1 795 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 FAM169AQ9Y6X4 670 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 SHBGP04278 402 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 CYP11A1P05108 521 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 ADORA2BP29275 332 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 CTNNB1P35222 781 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 LHX1P48742 406 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 PMS2P54278 862 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 BPIFB4P59827 614 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 C2CD6Q53TS8 623 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 PHLDB2Q86SQ0 1253 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 UNC93AQ86WB7 457 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 MCOLN2Q8IZK6 566 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 UBA3Q8TBC4 463 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 CPA5Q8WXQ8 436 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 CYFIP2Q96F07 1278 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 SYT15Q9BQS2 421 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 RHOBTB2Q9BYZ6 727 aa17.79■□□□□ 0.44
CDKN1A-201ENST00000244741 FGF18O76093 207 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 PTPN1P18031 435 aaKnown RBP17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 CA8P35219 290 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 KCNJ1P48048 391 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 IFFO1Q0D2I5 559 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 SGO2Q562F6 1265 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 ODF2Q5BJF6 829 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 RSPO2Q6UXX9 243 aaPredicted RBP17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 LRRTM3Q86VH5 581 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 SP7Q8TDD2 431 aaPredicted RBP17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 CLP1Q92989 425 aaKnown RBP17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 RNF25Q96BH1 459 aaPredicted RBP17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 TTPALQ9BTX7 342 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 TMLHEQ9NVH6 421 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 ANAPC7Q9UJX3 599 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 DSEQ9UL01 958 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 GBF1Q92538 1859 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 TSC2P49815 1807 aa17.78■□□□□ 0.44
CDKN1A-201ENST00000244741 TRANK1O15050 2925 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms