RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 NXF3Q9H4D5 531 aaKnown RBP13.3□□□□□ -0.28
SNAI1-201ENST00000244050 SYNCQ9H7C4 482 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 PLEKHA5Q9HAU0 1116 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 DPP3Q9NY33 737 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 EURLQ9NYK6 297 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 HMGXB4Q9UGU5 601 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 BARX2Q9UMQ3 279 aaPredicted RBP13.3□□□□□ -0.28
SNAI1-201ENST00000244050 SHOC2Q9UQ13 582 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 HES2Q9Y543 173 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 TRPV2Q9Y5S1 764 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 CDY2AQ9Y6F7 541 aa13.3□□□□□ -0.28
SNAI1-201ENST00000244050 DNAH12Q6ZR08 3092 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 ALOX15BO15296 676 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 ZSCAN5DPP0CG00 497 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 CST5P28325 142 aaPredicted RBP13.29□□□□□ -0.28
SNAI1-201ENST00000244050 PCK1P35558 622 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 MYO1EQ12965 1108 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 GPS1Q13098 491 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 CCDC38Q502W7 563 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 PCGF5Q86SE9 256 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 TDRPQ86YL5 185 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 TMEM130Q8N3G9 435 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 C9orf72Q96LT7 481 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 METTL5Q9NRN9 209 aaKnown RBP13.29□□□□□ -0.28
SNAI1-201ENST00000244050 AGAP1Q9UPQ3 857 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 NAALADL1Q9UQQ1 740 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 DERAQ9Y315 318 aa13.29□□□□□ -0.28
SNAI1-201ENST00000244050 TMEM120BA0PK00 339 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 M0QYV0 167 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 RECQL4O94761 1208 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 ETS1P14921 441 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 PECAM1P16284 738 aaPredicted RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 ITIH4Q14624 930 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 STILQ15468 1287 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 LRRC26Q2I0M4 334 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 LRIT3Q3SXY7 679 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 RNF187Q5TA31 235 aaPredicted RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 LCLAT1Q6UWP7 414 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 CCDC121Q6ZUS5 278 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 RNF180Q86T96 592 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 SERINC5Q86VE9 423 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 FAM228AQ86W67 206 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 LRRC34Q8IZ02 419 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 CCDC197Q8NCU1 140 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 ACSF2Q96CM8 615 aaPredicted RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 HEXIM2Q96MH2 286 aaKnown RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 TMEM121Q9BTD3 319 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 ZWILCHQ9H900 591 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 ACTR5Q9H9F9 607 aaPredicted RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 PPCSQ9HAB8 311 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 SAYSD1Q9NPB0 183 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 ASNSD1Q9NWL6 643 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 SGK1O00141 431 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 SMAPO00193 183 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 CST8O60676 142 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 RNF8O76064 485 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 ENDOD1O94919 500 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 TRUB2O95900 331 aaKnown RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 CTSHP09668 335 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 AKAP5P24588 427 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 MIPP30301 263 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 ZNF143P52747 638 aaPredicted RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 PLCB3Q01970 1234 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 ACTN3Q08043 901 aaPredicted RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 NR1H3Q13133 447 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 ORC1Q13415 861 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 RASA2Q15283 850 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 TTC31Q49AM3 519 aaPredicted RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 LACTB2Q53H82 288 aaPredicted RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 GLRA4Q5JXX5 417 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 TWF2Q6IBS0 349 aaKnown RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 CCSAPQ6IQ19 270 aaPredicted RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 GPR153Q6NV75 609 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 SESTD1Q86VW0 696 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 CYP4X1Q8N118 509 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 EMC1Q8N766 993 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 ACTL9Q8TC94 416 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 MAML1Q92585 1016 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 PRCCQ92733 491 aaPredicted RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 WNT8BQ93098 351 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 NSRP1Q9H0G5 558 aaKnown RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 KDM4CQ9H3R0 1056 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 CTNNAL1Q9UBT7 734 aa13.28□□□□□ -0.28
SNAI1-201ENST00000244050 FARP1Q9Y4F1 1045 aaPredicted RBP13.28□□□□□ -0.28
SNAI1-201ENST00000244050 FRMPD3Q5JV73 1810 aa13.27□□□□□ -0.28
SNAI1-201ENST00000244050 RPLP2P05387 115 aaKnown RBP13.27□□□□□ -0.29
SNAI1-201ENST00000244050 GHRP10912 638 aa13.27□□□□□ -0.29
SNAI1-201ENST00000244050 BRAFP15056 766 aa13.27□□□□□ -0.29
SNAI1-201ENST00000244050 CREB1P16220 341 aa13.27□□□□□ -0.29
SNAI1-201ENST00000244050 NDST1P52848 882 aa13.27□□□□□ -0.29
SNAI1-201ENST00000244050 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.29
SNAI1-201ENST00000244050 SMTNL2Q2TAL5 461 aa13.27□□□□□ -0.29
SNAI1-201ENST00000244050 KCNT1Q5JUK3 1230 aa13.27□□□□□ -0.29
SNAI1-201ENST00000244050 UBXN11Q5T124 520 aa13.27□□□□□ -0.29
SNAI1-201ENST00000244050 CENPUQ71F23 418 aa13.27□□□□□ -0.29
SNAI1-201ENST00000244050 Q7L0L9 218 aa13.27□□□□□ -0.29
SNAI1-201ENST00000244050 TAX1BP1Q86VP1 789 aa13.27□□□□□ -0.29
SNAI1-201ENST00000244050 PACS2Q86VP3 889 aa13.27□□□□□ -0.29
SNAI1-201ENST00000244050 TDHQ8IZJ6 230 aa13.27□□□□□ -0.29
SNAI1-201ENST00000244050 ANKS4BQ8N8V4 417 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms