RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 TMEM240Q5SV17 173 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 DMRTA1Q5VZB9 504 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 ADALQ6DHV7 355 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 SV2BQ7L1I2 683 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 C16orf59Q7L2K0 433 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 APLFQ8IW19 511 aaPredicted RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 CCDC63Q8NA47 563 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 LZICQ8WZA0 190 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 PPM1MQ96MI6 270 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 ZMAT2Q96NC0 199 aaKnown RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 USP28Q96RU2 1077 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 SMARCAD1Q9H4L7 1026 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 PPANQ9NQ55 473 aaKnown RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 ANKEF1Q9NU02 776 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 FBXO10Q9UK96 956 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 PNMA8BQ9ULN7 279 aaPredicted RBP3.84□□□□□ -1.79
UFM1-201ENST00000239878 CEP131Q9UPN4 1083 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 NOX1Q9Y5S8 564 aa3.84□□□□□ -1.79
UFM1-201ENST00000239878 SMIM35A0A1B0GVV1 85 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 TARSL2A2RTX5 802 aaKnown RBP3.84□□□□□ -1.8
UFM1-201ENST00000239878 TBKBP1A7MCY6 615 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 TEX28O15482 410 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 ARHGAP6O43182 974 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 DYNC1LI2O43237 492 aaPredicted RBP3.84□□□□□ -1.8
UFM1-201ENST00000239878 MAFO75444 373 aaPredicted RBP3.84□□□□□ -1.8
UFM1-201ENST00000239878 DGKIO75912 1065 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 MAP3K6O95382 1288 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 OXSR1O95747 527 aaPredicted RBP3.84□□□□□ -1.8
UFM1-201ENST00000239878 PSAPP07602 524 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 UBL4AP11441 157 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 ATP1A3P13637 1013 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 ATP2A2P16615 1042 aaKnown RBP3.84□□□□□ -1.8
UFM1-201ENST00000239878 RFC2P35250 354 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 ARL2P36404 184 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 LONP1P36776 959 aaKnown RBP3.84□□□□□ -1.8
UFM1-201ENST00000239878 UBA7P41226 1012 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 PSMC6P62333 389 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 KRT85P78386 507 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 PRKCEQ02156 737 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 GUCY2DQ02846 1103 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 MSLNQ13421 630 aaPredicted RBP3.84□□□□□ -1.8
UFM1-201ENST00000239878 LSAMPQ13449 338 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 LETM2Q2VYF4 491 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 ZC2HC1CQ53FD0 456 aaPredicted RBP3.84□□□□□ -1.8
UFM1-201ENST00000239878 ZNF484Q5JVG2 852 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 RESP18Q5W5W9 173 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 KAZNQ674X7 775 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 FAM180BQ6P0A1 224 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 SHC4Q6S5L8 630 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 CXCL17Q6UXB2 119 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 KDM7AQ6ZMT4 941 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 AGMOQ6ZNB7 445 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 CCDC73Q6ZRK6 1079 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 KCNK18Q7Z418 384 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 C11orf74Q86VG3 221 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 CATSPER3Q86XQ3 398 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 TREML1Q86YW5 311 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 DAW1Q8N136 415 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 CPA6Q8N4T0 437 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 FOXJ1Q92949 421 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 FERMT2Q96AC1 680 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 DHTKD1Q96HY7 919 aaPredicted RBP3.84□□□□□ -1.8
UFM1-201ENST00000239878 CCT7Q99832 543 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 SDF4Q9BRK5 362 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 B3GNT4Q9C0J1 378 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 DRC3Q9H069 523 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 AAASQ9NRG9 546 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 DISC1Q9NRI5 854 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 RMND1Q9NWS8 449 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 ERAP1Q9NZ08 941 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 PDP2Q9P2J9 529 aa3.84□□□□□ -1.8
UFM1-201ENST00000239878 TSC2P49815 1807 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 A0A1W2PPC1 479 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 A0A1W2PQ27 194 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 A0A1W2PQ64 194 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 A0A1W2PQD8 194 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 KBTBD13C9JR72 458 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 KDM1AO60341 852 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 EFEMP2O95967 443 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 TIMP1P01033 207 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 RPLP2P05387 115 aaKnown RBP3.83□□□□□ -1.8
UFM1-201ENST00000239878 ITGA2BP08514 1039 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 CELA3AP09093 270 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 ARAFP10398 606 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 EPB41P11171 864 aaKnown RBP3.83□□□□□ -1.8
UFM1-201ENST00000239878 CCND1P24385 295 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 PCK1P35558 622 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 PSMC5P62195 406 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 MPP1Q00013 466 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 SF3A3Q12874 501 aaKnown RBP eCLIP3.83□□□□□ -1.8
UFM1-201ENST00000239878 NNTQ13423 1086 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 TRIM29Q14134 588 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 GRIK4Q16099 956 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 PCSK7Q16549 785 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 C1orf228Q6PIY5 440 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 BNC2Q6ZN30 1099 aaPredicted RBP3.83□□□□□ -1.8
UFM1-201ENST00000239878 C1orf186Q6ZWK4 172 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 ZNF365Q70YC5 407 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 ALDH16A1Q8IZ83 802 aa3.83□□□□□ -1.8
UFM1-201ENST00000239878 SYT2Q8N9I0 419 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms