RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 PLPPR4Q7Z2D5 763 aa19.52■□□□□ 0.71
CPSF3-201ENST00000238112 IQCGQ9H095 443 aaKnown RBP19.52■□□□□ 0.71
CPSF3-201ENST00000238112 TLE6Q9H808 572 aa19.52■□□□□ 0.71
CPSF3-201ENST00000238112 RAB6BQ9NRW1 208 aa19.52■□□□□ 0.71
CPSF3-201ENST00000238112 MTO1Q9Y2Z2 717 aaKnown RBP19.52■□□□□ 0.71
CPSF3-201ENST00000238112 CFAP69A5D8W1 941 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 LACTBL1A8MY62 500 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 CCDC22O60826 627 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 LGR5O75473 907 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 LUC7L3O95232 432 aaKnown RBP19.51■□□□□ 0.71
CPSF3-201ENST00000238112 DHRS4L1P0CG22 281 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 TPBGLP0DKB5 382 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 VDRP11473 427 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 ETV4P43268 484 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 SLC18A2Q05940 514 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 KRT81Q14533 505 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 SH3PXD2AQ5TCZ1 1133 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 JADE1Q6IE81 842 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 UBA3Q8TBC4 463 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 CFAP36Q96G28 342 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 MPHOSPH6Q99547 160 aaKnown RBP19.51■□□□□ 0.71
CPSF3-201ENST00000238112 SPATC1LQ9H0A9 340 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 PAK5Q9P286 719 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 NUMBLQ9Y6R0 609 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 TGDSO95455 350 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 PDGFRAP16234 1089 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 MBTD1Q05BQ5 628 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 MAP7D3Q8IWC1 876 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 TMEM130Q8N3G9 435 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 RXFP2Q8WXD0 754 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 DENND2DQ9H6A0 471 aaPredicted RBP19.51■□□□□ 0.71
CPSF3-201ENST00000238112 CYP3A43Q9HB55 503 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 GGA3Q9NZ52 723 aa19.51■□□□□ 0.71
CPSF3-201ENST00000238112 AVILO75366 819 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 ECM2O94769 699 aaPredicted RBP19.5■□□□□ 0.71
CPSF3-201ENST00000238112 ENDOD1O94919 500 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 BGNP21810 368 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 ATICP31939 592 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 CLCN3P51790 818 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 CDO1Q16878 200 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 CELF3Q5SZQ8 465 aaKnown RBP19.5■□□□□ 0.71
CPSF3-201ENST00000238112 OR6B2Q6IFH4 312 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 EFCAB12Q6NXP0 572 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 SLC26A11Q86WA9 606 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 CTAGE3PQ8IX95 158 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 ENDOVQ8N8Q3 282 aaKnown RBP19.5■□□□□ 0.71
CPSF3-201ENST00000238112 SH3TC2Q8TF17 1288 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 TMEM120AQ9BXJ8 343 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 MINDY3Q9H8M7 445 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 GPR25O00155 361 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 PIK3R2O00459 728 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 COPEO14579 308 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 KCNN4O15554 427 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 LMNAP02545 664 aaKnown RBP19.5■□□□□ 0.71
CPSF3-201ENST00000238112 STAG3L1P0CL83 205 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 CDK16Q00536 496 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 PRKD1Q15139 912 aaPredicted RBP19.5■□□□□ 0.71
CPSF3-201ENST00000238112 C15orf59Q2T9L4 293 aaPredicted RBP19.5■□□□□ 0.71
CPSF3-201ENST00000238112 TTC39BQ5VTQ0 682 aaPredicted RBP19.5■□□□□ 0.71
CPSF3-201ENST00000238112 SLC16A10Q8TF71 515 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 NAF1Q96HR8 494 aaKnown RBP19.5■□□□□ 0.71
CPSF3-201ENST00000238112 SPATA33Q96N06 139 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 RNF157Q96PX1 679 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 FRMD8Q9BZ67 464 aaPredicted RBP19.5■□□□□ 0.71
CPSF3-201ENST00000238112 MIS12Q9H081 205 aa19.5■□□□□ 0.71
CPSF3-201ENST00000238112 C2CD4BA6NLJ0 364 aa19.49■□□□□ 0.71
CPSF3-201ENST00000238112 H0Y3Z8 333 aa19.49■□□□□ 0.71
CPSF3-201ENST00000238112 FZD9O00144 591 aa19.49■□□□□ 0.71
CPSF3-201ENST00000238112 ENTPD5O75356 428 aa19.49■□□□□ 0.71
CPSF3-201ENST00000238112 SERPINB3P29508 390 aa19.49■□□□□ 0.71
CPSF3-201ENST00000238112 CYP4V2Q6ZWL3 525 aaPredicted RBP19.49■□□□□ 0.71
CPSF3-201ENST00000238112 PPM1NQ8N819 430 aa19.49■□□□□ 0.71
CPSF3-201ENST00000238112 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.49■□□□□ 0.71
CPSF3-201ENST00000238112 TTC8Q8TAM2 541 aa19.49■□□□□ 0.71
CPSF3-201ENST00000238112 NSL1Q96IY1 281 aa19.49■□□□□ 0.71
CPSF3-201ENST00000238112 MIPEPQ99797 713 aa19.49■□□□□ 0.71
CPSF3-201ENST00000238112 BTBD10Q9BSF8 475 aa19.49■□□□□ 0.71
CPSF3-201ENST00000238112 ASCC2Q9H1I8 757 aaPredicted RBP19.49■□□□□ 0.71
CPSF3-201ENST00000238112 PNPLA8Q9NP80 782 aa19.49■□□□□ 0.71
CPSF3-201ENST00000238112 DNAJC6O75061 913 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 KRT37O76014 449 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 SERPINB4P48594 390 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 SH2D5Q6ZV89 423 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 FAM183BPQ6ZVS7 135 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 TRPM4Q8TD43 1214 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 ZBTB10Q96DT7 871 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 ARL8BQ9NVJ2 186 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 PRMT7Q9NVM4 692 aaPredicted RBP19.48■□□□□ 0.71
CPSF3-201ENST00000238112 TRIM49D1C9J1S8 452 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 E5RJQ4 531 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 GRAP2O75791 330 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 ZBED1O96006 694 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 YWHAZP63104 245 aaKnown RBP19.48■□□□□ 0.71
CPSF3-201ENST00000238112 TNFAIP2Q03169 654 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 RAB6CQ53S08 254 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 SCYL2Q6P3W7 929 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 CCDC62Q6P9F0 684 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 PRPF39Q86UA1 669 aaKnown RBP19.48■□□□□ 0.71
CPSF3-201ENST00000238112 SKA1Q96BD8 255 aa19.48■□□□□ 0.71
CPSF3-201ENST00000238112 PTCD3Q96EY7 689 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 450.2 ms